Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=13294645 Score = 100 bits (110), Expect = 2e-16 Identities = 404/621 (65%), Gaps = 13/621 (2%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 ||||| ||||| ||||| || |||||||||| |||| ||||| || || |||||| Sbjct 9186729 CACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAGGTTAAT 9186670 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 |||||||| | ||||| |||||| ||||| || || | | || || || ||||| Sbjct 9186669 CCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCGAGCAGAAGCTACCGGAGAAGAAG 9186610 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727 || ||||| || ||| || || || | || | || | ||| | | | Sbjct 9186609 ATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAG-TCTGAGAT--CCATCG 9186553 Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| || | ||||| | ||||| || ||||| || || || | || ||| Sbjct 9186552 ATCCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGATCGCGCGG 9186493 Query 4788 AATA-ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846 || | || || | | | | |||| || |||||||| | || || || ||||| Sbjct 9186492 AAGAGATGGTCTCTCTCTTTGTTGTCCTTG-ATGTAAGTGTCGAGGAGGAGACTGTACAT 9186434 Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTTCTGTTA 4905 || || ||||| || || || || ||||| || ||||| |||||| | || || | | Sbjct 9186433 CTCGGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCA-CGCGCCTCCGAGA 9186375 Query 4906 CTTGAACTTCGTTACA-AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964 |||| || ||| ||| ||||| | | || || || || ||||| ||| Sbjct 9186374 CTTGCACATCG-GACATAAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCG 9186316 Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAG 5024 || || || || | || || || |||| ||||| | || || || | |||| Sbjct 9186315 GCGAAGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCGCCGTCGTTTAGATTCTCCCAG 9186256 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 | | | |||| | | ||| |||||||| | ||||| || || ||||| || || Sbjct 9186255 TCGCGACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCCTTC 9186196 Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGT-TGTCGT 5142 |||||||| ||| || | || || || ||||| | || ||| ||||||| || || Sbjct 9186195 TTGTACATCTCCCAGATCTGTGGGTATTGGATCGGGAACAT-ACAGAATCTGTCTGGGGT 9186137 Query 5143 TAGGTGTAAGAAGCGGTTCTT 5163 | || || | |||||| |||| Sbjct 9186136 T-GGAGTCAAAAGCGGCTCTT 9186117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427042016800181