Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
>seq2
Length=13294645
Score = 100 bits (110), Expect = 2e-16
Identities = 404/621 (65%), Gaps = 13/621 (2%)
Strand=Plus/Minus
Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607
||||| ||||| ||||| || |||||||||| |||| ||||| || || ||||||
Sbjct 9186729 CACGCGAAATCGCAATGTAAGCCTTCGTCTCGTGAGATCAACTCGTTGGAGAAGGTTAAT 9186670
Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667
|||||||| | ||||| |||||| ||||| || || | | || || || |||||
Sbjct 9186669 CCGGGCATGAGACCTCGCTTTTTCAGCCAGAAAATCGAGCAGAAGCTACCGGAGAAGAAG 9186610
Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTA 4727
|| ||||| || ||| || || || | || | || | ||| | | |
Sbjct 9186609 ATACCTTCGACACAGGCGAAAGCGACGATTCTCTCGGCAAAAG-TCTGAGAT--CCATCG 9186553
Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787
||||| || | ||||| | ||||| || ||||| || || || | || |||
Sbjct 9186552 ATCCACTTCATCGCCCACTGGGCTTTCTTGGCGACGCAAGGGATGGTTTCGATCGCGCGG 9186493
Query 4788 AATA-ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846
|| | || || | | | | |||| || |||||||| | || || || |||||
Sbjct 9186492 AAGAGATGGTCTCTCTCTTTGTTGTCCTTG-ATGTAAGTGTCGAGGAGGAGACTGTACAT 9186434
Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTTCTGTTA 4905
|| || ||||| || || || || ||||| || ||||| |||||| | || || | |
Sbjct 9186433 CTCGGAGTGTATGTTCTCAATCGCGATCTGGAAACCGTAGAAAGCA-CGCGCCTCCGAGA 9186375
Query 4906 CTTGAACTTCGTTACA-AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964
|||| || ||| ||| ||||| | | || || || || ||||| |||
Sbjct 9186374 CTTGCACATCG-GACATAAATCGGGAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCG 9186316
Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAG 5024
|| || || || | || || || |||| ||||| | || || || | ||||
Sbjct 9186315 GCGAAGAAGGCGAGTACGTGTTTGATGAAGTGTCGTTCGCCGTCGTTTAGATTCTCCCAG 9186256
Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084
| | | |||| | | ||| |||||||| | ||||| || || ||||| || ||
Sbjct 9186255 TCGCGACCGTCTTGCGAAAGATCGACTTCTTCGGCCGTCCAGAAAGATGCTTCGGCCTTC 9186196
Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGT-TGTCGT 5142
|||||||| ||| || | || || || ||||| | || ||| ||||||| || ||
Sbjct 9186195 TTGTACATCTCCCAGATCTGTGGGTATTGGATCGGGAACAT-ACAGAATCTGTCTGGGGT 9186137
Query 5143 TAGGTGTAAGAAGCGGTTCTT 5163
| || || | |||||| ||||
Sbjct 9186136 T-GGAGTCAAAAGCGGCTCTT 9186117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427042016800181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |