Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 2e-12
seq4 87.8 2e-12
>seq7
Length=17055980
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 77141 CAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 77200
||| ||||| ||| | ||||| || |||||| ||||| | | ||||||| || || |
Sbjct 15542654 CAAGACTCTGCGACTATAAATGTTTGAGGTATACGGTTCAAAACATTCATTATTCCCAAG 15542595
Query 77201 AATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260
|||||| || |||||||||||||| ||||| |||| | | |||||||| ||||
Sbjct 15542594 AATTTGGCTGGTTGAAGCAGTTGGCATTGGTGCTACCAGAAGAGAATTTCTGATTCCATT 15542535
Query 77261 TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCA 77320
|| || ||||| | ||| ||| ||||| | | ||||| | |||| |||
Sbjct 15542534 CTTTGAAATAATATCTCTGAGAGCAGCCCAGTCCCAGCGGTTCGAAGGAATTACATTCCA 15542475
Query 77321 AAGATCGTATTGTAGAATTCC 77341
| ||| ||| ||||||||
Sbjct 15542474 CATATCAGGTTGAAGAATTCC 15542454
>seq4
Length=14320061
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218
||||| || || | ||| | || || | || | || | || |||||| | ||||||
Sbjct 321165 CCTCCTTGGTCAACATAACGAGCCGTATCGTTGAATACGCGCAGCATTGGGACAATACCA 321106
Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278
||||| ||||||||||| ||| ||| || |||||| |||| || |||||| || ||
Sbjct 321105 TTAGACGTTCCATTTGTGCCACGAATGTAGCTTCCAGTTGCACGGATATTATGAACTGAA 321046
Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338
| || || || || || || ||| | ||| || ||| | ||| || ||||||
Sbjct 321045 ACACCAATACCCCCAGCGGATTTGCTTATAACAGCACACTCTTTTAGTGTTTCATAGATA 320986
Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379
||||| || || ||||| |||| | ||||| |||||
Sbjct 320985 CCCTCAATGCTATCATCTTTCATACAGATCAGAAAGCAGCT 320945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694656148344480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |