Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq113 86.0 7e-12
seq2 86.0 7e-12
>seq113
Length=54118
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211
||||||| | ||||| || | || || || || ||||||||||| | || |
Sbjct 24729 TTGAGTGCGACGACGACGTTTACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGC 24670
Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271
||||| ||||| |||||| | || ||||| ||||| || ||| | | | || | |
Sbjct 24669 CTTACTCTTGCCGTGCTGGTTCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTG 24610
Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331
| || || || || |||||||||||||||||||| | || ||| || |||| |
Sbjct 24609 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCA 24550
Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386
|||||| | |||||||| ||| | |||||||| | |||||||| ||
Sbjct 24549 CTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 24495
>seq2
Length=13294645
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211
||||||| | ||||| || | || || || || ||||||||||| | || |
Sbjct 3079459 TTGAGTGCGACGACGACGTTTACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGC 3079518
Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271
||||| ||||| |||||| | || ||||| ||||| || ||| | | | || | |
Sbjct 3079519 CTTACTCTTGCCGTGCTGGTTCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTG 3079578
Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331
| || || || || |||||||||||||||||||| | || ||| || |||| |
Sbjct 3079579 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCA 3079638
Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386
|||||| | |||||||| ||| | |||||||| | |||||||| ||
Sbjct 3079639 CTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 3079693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596296339755120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |