Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq113 86.0 7e-12 seq2 86.0 7e-12 >seq113 Length=54118 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211 ||||||| | ||||| || | || || || || ||||||||||| | || | Sbjct 24729 TTGAGTGCGACGACGACGTTTACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGC 24670 Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271 ||||| ||||| |||||| | || ||||| ||||| || ||| | | | || | | Sbjct 24669 CTTACTCTTGCCGTGCTGGTTCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTG 24610 Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331 | || || || || |||||||||||||||||||| | || ||| || |||| | Sbjct 24609 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCA 24550 Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 |||||| | |||||||| ||| | |||||||| | |||||||| || Sbjct 24549 CTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 24495 >seq2 Length=13294645 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211 ||||||| | ||||| || | || || || || ||||||||||| | || | Sbjct 3079459 TTGAGTGCGACGACGACGTTTACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGC 3079518 Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271 ||||| ||||| |||||| | || ||||| ||||| || ||| | | | || | | Sbjct 3079519 CTTACTCTTGCCGTGCTGGTTCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTG 3079578 Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331 | || || || || |||||||||||||||||||| | || ||| || |||| | Sbjct 3079579 TTGACCAGTCTGACCAGAGTTTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCA 3079638 Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 |||||| | |||||||| ||| | |||||||| | |||||||| || Sbjct 3079639 CTTGTGCGGCTTATCCTACTTCTGATGTTACCATTGAGACCCACAAAGAAGAAGA 3079693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596296339755120