Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq762 192 1e-43 seq642 192 1e-43 seq6 192 1e-43 seq3 187 6e-42 seq4 183 7e-41 seq5 165 2e-35 seq477 93.3 1e-13 >seq762 Length=4953 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || ||||||||||||||||||||||| ||| Sbjct 366 CAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCTGAC 307 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| ||||| || ||||| || |||||||| ||||| Sbjct 306 ACCATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAGCAG 247 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||||| ||| | || || || | ||| | |||||||| ||| || Sbjct 246 AGACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAACATC 187 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || ||||| ||| | || ||| Sbjct 186 CAGAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTC 151 Score = 152 bits (168), Expect = 1e-31 Identities = 143/181 (79%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 || || || ||||| || |||||||| ||||| |||||||| || ||||| || ||| Sbjct 4953 GGCAAGACCATCACACTGGAGGTGGAGAGCTCCGACACCATTGACAACGTGAAGGCCAAG 4894 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 ||||| ||||| ||||||||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 4893 ATTCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAG 4834 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127 || || ||||| | || || || ||||| ||| |||| ||||| || || || || ||| Sbjct 4833 CTTGAGGATGGTCGCACACTGGCTGATTACAACATCCAGAAAGAGTCGACCCTTCA-CTT 4775 Query 178128 G 178128 | Sbjct 4774 G 4774 Score = 125 bits (138), Expect = 2e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 138 CAGATCTTCGTCAAAACGCTAACCGGAAAGACGATCACCCTCGAGGTCGAGAGTTCTGAC 79 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct 78 ACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGAATCCCACCGGACCAGCAG 19 Query 178044 CGACTTATCTTCGCCGG 178060 | | ||||| ||||| Sbjct 18 AGGTTGATCTTTGCCGG 2 >seq642 Length=6837 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||||||||||| |||||||| ||| Sbjct 365 CAGATCTTCGTTAAGACTCTCACCGGGAAGACTATCACCCTCGAGGTTGAAAGCTCTGAC 306 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| |||||||| || || || |||||||| |||||| Sbjct 305 ACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAGCAA 246 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||||||||||||||| ||| | ||||| || | ||| | |||||||| ||| || Sbjct 245 AGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTTTGGCCGATTACAACATC 186 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || ||||| || || || | ||| | |||||| Sbjct 185 CAGAAGGAATCCACCCTCCACTTGGTTCTCAGACTC 150 Score = 131 bits (144), Expect = 4e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 137 CAGATCTTCGTCAAAACCCTAACCGGAAAGACGATCACCCTCGAGGTCGAGAGTTCTGAC 78 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct 77 ACCATCGACAACGTCAAGGCGAAAATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAG 18 Query 178044 CGACTTATCTTCGCCGG 178060 | | ||||||||||| Sbjct 17 AGGTTGATCTTCGCCGG 1 >seq6 Length=18523719 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || ||||||||||||||||||||||| ||| Sbjct 1438502 CAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCTGAC 1438443 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| ||||| || ||||| || |||||||| ||||| Sbjct 1438442 ACCATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAGCAG 1438383 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||||| ||| | || || || | ||| | |||||||| ||| || Sbjct 1438382 AGACTTATCTTCGCCGGAAAGCAGTTGGAGGACGGCCGAACTTTGGCCGATTACAACATC 1438323 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || ||||| ||| | || ||| Sbjct 1438322 CAGAAGGAGTCGACCCTTCATCTCGTTCTCAGGCTC 1438287 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||||||||||| |||||||| ||| Sbjct 1443404 CAGATCTTCGTTAAGACTCTCACCGGGAAGACTATCACCCTCGAGGTTGAAAGCTCTGAC 1443345 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| |||||||| || || || |||||||| |||||| Sbjct 1443344 ACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGATCAGCAA 1443285 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||||||||||||||| ||| | ||||| || | ||| | |||||||| ||| || Sbjct 1443284 AGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTTTGGCCGATTACAACATC 1443225 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || ||||| || || || | ||| | |||||| Sbjct 1443224 CAGAAGGAATCCACCCTCCACTTGGTTCTCAGACTC 1443189 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| || || || ||||| || || || ||||| || ||||||||| Sbjct 17514221 CAGATTTTTGTGAAAACCCTTACCGGGAAAACCATTACTCTTGAGGTTGAGAGCTCAGAC 17514280 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||||||||||||| ||||| ||||| || ||||| || Sbjct 17514281 ACAATCGATAACGTCAAGGCAAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAG 17514340 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||| || |||||||| || ||||| | || ||||| ||||| || || Sbjct 17514341 AGACTCATCTTCGCTGGGAAACAGCTGGAGGATGGTCGCACACTTGCGGATTACAATATC 17514400 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || |||||||| || || ||||| ||| Sbjct 17514401 CAGAAGGAATCAACCCTTCACCTTGTGTTG 17514430 Score = 183 bits (202), Expect = 7e-41 Identities = 161/201 (80%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||| | ||||| || || ||||| |||||||| || ||||| ||| Sbjct 17513765 CAAATCTTTGTGAAAACTTTAACAGGCAAGACCATCACTCTCGAGGTCGAGAGCTCTGAC 17513824 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| |||||| || || ||||| ||||| |||||||||||||| Sbjct 17513825 ACCATCGACAATGTCAAAGCAAAGATCCAAGATAAAGAGGGAATTCCTCCGGACCAGCAG 17513884 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||||||||| || ||||| |||||||| | || || || || || ||| || Sbjct 17513885 AGGCTTATCTTCGCCGGTAAGCAGCTAGAAGATGGTCGCACACTCGCTGACTACAACATC 17513944 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || ||||| || || || ||| Sbjct 17513945 CAGAAAGAGTCCACCCTCCAT 17513965 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || ||||| ||||| | ||||| || || |||||| Sbjct 17513993 CAGATTTTTGTCAAGACCCTCACGGGCAAAACCATCACTTTGGAGGTTGAGAGTTCAGAC 17514052 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| ||||| ||||| || |||||||| Sbjct 17514053 ACAATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAGCAG 17514112 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || |||||||| ||||| ||| | || || || ||||| ||| || Sbjct 17514113 AGACTCATCTTTGCGGGGAAACAGCTTGAAGACGGACGCACCCTCGCGGATTACAACATC 17514172 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || |||||||| Sbjct 17514173 CAAAAGGAGTCTACGCTCCATCTTGT 17514198 Score = 159 bits (176), Expect = 8e-34 Identities = 161/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||| | ||||| || || || ||| | ||||| || ||||||||| Sbjct 17514449 CAAATATTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCAGAC 17514508 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| ||||| |||||||||||||| || Sbjct 17514509 ACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAACAG 17514568 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || |||||||| || |||||||| || ||||| ||||| | ||||| || || || Sbjct 17514569 AGGCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTTTGGCCGACTACAATATC 17514628 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || || || || |||| || Sbjct 17514629 CAGAAGGAGTCGACTCTTCA-CTTGGTT 17514655 Score = 152 bits (168), Expect = 1e-31 Identities = 143/181 (79%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 || || || ||||| || |||||||| ||||| |||||||| || ||||| || ||| Sbjct 1443088 GGCAAGACCATCACACTGGAGGTGGAGAGCTCCGACACCATTGACAACGTGAAGGCCAAG 1443029 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 ||||| ||||| ||||||||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 1443028 ATTCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAG 1442969 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127 || || ||||| | || || || ||||| ||| |||| ||||| || || || || ||| Sbjct 1442968 CTTGAGGATGGTCGCACACTGGCTGATTACAACATCCAGAAAGAGTCGACCCTTCA-CTT 1442910 Query 178128 G 178128 | Sbjct 1442909 G 1442909 Score = 140 bits (154), Expect = 8e-28 Identities = 137/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 || || || ||||| || |||||||| ||||| |||||||| || ||||| || ||| Sbjct 1438185 GGTAAGACCATCACACTGGAGGTGGAGAGCTCGGACACCATTGACAACGTGAAGGCCAAG 1438126 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 || || || || ||||| ||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 1438125 ATCCAAGATAAGGAAGGTATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAG 1438066 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| ||||| | || || || ||||| || |||| ||||| || || || ||| Sbjct 1438065 CTCGAGGATGGTCGCACACTGGCTGATTACAATATCCAGAAAGAGTCGACCCTTCAT 1438009 Score = 86.0 bits (94), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 1438274 CAGATCTTCGTCAAAACGCTAACCGGAAAGACGATCACCCTCGAGGTCGAGAGTTCTGAC 1438215 Query 177984 ACCATCGAGAACGTCAA 178000 |||||||| |||||||| Sbjct 1438214 ACCATCGACAACGTCAA 1438198 Score = 86.0 bits (94), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 1443176 CAGATCTTCGTCAAAACCCTAACCGGAAAGACGATCACCCTCGAGGTCGAGAGTTCTGAC 1443117 Query 177984 ACCATCGAGAACGTCAA 178000 |||||||| |||||||| Sbjct 1443116 ACCATCGACAACGTCAA 1443100 >seq3 Length=15215380 Score = 187 bits (206), Expect = 6e-42 Identities = 166/208 (80%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 177926 AATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACAC 177985 ||| || || || ||||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 11192754 AATCTTTGTTAAGACTCTTACAGGCAAGACCATAACTCTTGAGGTCGAAAGTTCAGACAC 11192695 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 ||| || ||| |||| ||||| || ||||| |||||||||| |||||| ||||| | Sbjct 11192694 CATTGACAACATCAAGACCAAGATCCAAGACAAGGAAGGAATCCTTCCGGAACAGCAGAG 11192635 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 |||||||| ||||| |||||||| || ||||| |||||||| ||||| ||| |||| Sbjct 11192634 GCTTATCTTTGCCGGTAAACAGCTTGAGGATGGCCATACTCTTGCGGATTACAACATCCA 11192575 Query 178106 AAAAGAATCAACACTGCATCTTGTTTTG 178133 ||| ||||||||||| |||||||| ||| Sbjct 11192574 AAAGGAATCAACACTTCATCTTGTGTTG 11192547 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| ||||| || ||||| || |||||||| || || || |||||| Sbjct 11243488 CAAATATTTGTGAAAACACTCACTGGCAAAACCATTACCCTCGAAGTTGAGAGTTCAGAC 11243547 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || ||||||||| ||||| ||||| ||| | |||||||| | Sbjct 11243548 ACTGTTGATAATGTAAAGACAAAGATTCAAGACAAGGAAGGGATCGCGCCGGACCAATAG 11243607 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||||||||| ||||| | || ||||| ||||| ||| || Sbjct 11243608 AGATTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACCCTTGCAGATTACAACATC 11243667 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| ||||||||||| || ||||| ||| Sbjct 11243668 CAAAAGGAATCAACACTTCACCTTGTGTTG 11243697 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||| | || || || || ||||| || ||||| |||||||| || Sbjct 11243716 CAGATCTTTGTCAAGACTTTGACGGGTAAGACCATCACTCTTGAGGTTGAAAGCTCTGAT 11243775 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || || || || || |||||||| || |||||||| |||| ||||||||||| Sbjct 11243776 ATGATTGATAATGTGAAGGCCAAGATTCAAGATAAAGAAGGCATCCAACCGGACCAGCAG 11243835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG-GACTCTTGCCGATTATAACGT 178102 | || ||||| ||||| || |||||||||||||| | |||| | || ||||||||| | Sbjct 11243836 AGGCTAATCTTTGCCGGGAATCAGCTCGAAGATGGTCGCGACTTTAGCGGATTATAACAT 11243895 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || || || |||||| Sbjct 11243896 TCAGAAAGAGTCTACTCTTCACCTTGTT 11243923 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/110 (77%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| || || || || || ||||| |||||||| ||| Sbjct 3298064 AAAATGC---AGATCTTTGTGAAAACCCTAACTGGCAAGACCATCACTCTCGAGGTCGAA 3298008 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||| ||||||||||| || ||||| |||||||| ||||| ||||| Sbjct 3298007 AGCAGCGACACCATCGATAATGTCAAGGCCAAGATTCAAGACAAGGAAGG 3297958 >seq4 Length=14320061 Score = 183 bits (202), Expect = 7e-41 Identities = 164/206 (80%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || ||||| || || || ||||||||||| || ||| ||| Sbjct 6306332 CAGATCTTCGTGAAAACCCTAACAGGGAAGACAATTACCCTCGAGGTCGAGTCCTCCGAC 6306273 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct 6306272 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAG 6306213 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||||||||| |||||||| || ||| | || || ||||| || ||| || Sbjct 6306212 CGATTGATTTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTACAACATC 6306153 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 6306152 CAGAAGGAATCGACCCTTCACCTCGT 6306127 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| ||||| || || || |||||||| ||||| || ||| ||| Sbjct 10475113 CAGATTTTTGTGAAAACACTCACTGGCAAGACCATCACCCTAGAGGTCGAGAGCAGTGAC 10475054 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| ||||| |||||||||||||| Sbjct 10475053 ACCATCGACAATGTCAAGGCTAAGATCCAGGACAAAGAAGG 10475013 >seq5 Length=16150104 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || || ||||| ||||| ||| ||| ||| Sbjct 6389058 CAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTCGAATCCTCCGAC 6389117 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 6389118 ACCATCGACAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAGCAG 6389177 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || |||||||| |||||||| ||||| || | || || ||||| || ||| | Sbjct 6389178 CGATTAATTTTCGCCGGGAAACAGCTGGAAGACGGCCGTACGCTCGCCGACTACAACATT 6389237 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||||||| || Sbjct 6389238 CAGAAGGAGTCGACGCTGCATCTGGT 6389263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||| | Sbjct 3143064 AGGTATCCCTCCGGACCAGCAGCGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCG 3143123 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||| | || || || ||| |||| |||| Sbjct 3143124 AACTTTGGCTGACTACAACATCCAGAAAG 3143152 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || |||||||||||||| || ||| ||| Sbjct 3142883 CAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 3142942 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| ||||| || ||||||||||| Sbjct 3142943 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGG 3142983 >seq477 Length=12660 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||||||||||||||| ||| | |||||||||||||| |||||||||||||| | Sbjct 427 AGGTATCCCTCCGGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGCCG 368 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||| | || || || ||| |||| |||| Sbjct 367 AACTTTGGCTGACTACAACATCCAGAAAG 339 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || |||||||||||||| || ||| ||| Sbjct 630 CAGATATTCGTGAAAACCCTAACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 571 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| || || || ||||||||||| Sbjct 570 ACCATCGACAATGTCAAGGCCAAAATCCAAGACAAAGAAGG 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203708728971658