Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq13 100 3e-16 seq15 82.4 8e-11 >seq13 Length=5050363 Score = 100 bits (110), Expect = 3e-16 Identities = 370/579 (64%), Gaps = 3/579 (1%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || || ||||| ||||| || || || |||| || | ||| || || || || Sbjct 3176223 CAGGCACGCAAAATCACAATGCAAACCTTCATCTCGCGAAATTAATTCATTGGAGAAAGT 3176164 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 ||| || |||||| | || || || || ||||||||||| ||| ||| ||| || || Sbjct 3176163 CAAGCCCGGCATCATCCCGCGCTTTTTCAACCAAAATATGGCGCAGAAGCTCCCCGAGAA 3176104 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||||| ||||| || | ||||| |||| ||| || || || | | || | Sbjct 3176103 AAATATCCCCTCAACACAAGCAAAGGCGACTAACCGCTCAGCAAA---GGATTCAGAGCC 3176047 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | |||||| | |||||| ||| || | | | |||| | || || || || Sbjct 3176046 ATCAATCCAGCGCATGGCCCACTTGGCCTTCTTTTCCACGCAAGGAACGGTCTCAATTGC 3175987 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || | | | ||| || ||| | || || | || | || || ||||| Sbjct 3175986 GCGGAAGAGGTGGTTTTTCTCGGCCGAGTCTTTGATGTAAGACTCAAGCAGAAGACTGTA 3175927 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 ||| ||||| || |||||||| ||||| || || || ||||| ||| ||||| || | Sbjct 3175926 CATCTCGGAATGAATGTTCTCAATGGCAATTTGGAAGCCGTAGAAGGCACGGGCCTCGGA 3175867 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 || || || || ||| ||| | || |||||||| ||||| || ||| || Sbjct 3175866 GATCTGGACCTCTTTCATGAAGCGTCCAGCGAGATTTTCCAAAACGATACCATCGGAGGC 3175807 Query 17380 GGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCA 17439 || || || || | | || || | ||||| || ||||| | || || | ||| Sbjct 3175806 AGCAAAGAAGGCGAGGACGTGTTTGACGAAATGCTTCTCGTCGGAGGTGAGGGCTTCCCA 3175747 Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499 | | || | |||| ||| ||||| |||| |||||| || ||| |||| || Sbjct 3175746 ATGGCGGAGGTCCTGAGATAAATCAACTTCCTCGGCGGTCCAGAAGGAAGCTTCTGCTTT 3175687 Query 17500 TTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||| ||||| | ||| | | ||| || |||||||| Sbjct 3175686 TTTGTACATCTCCCAGACCTGTGGGTAGTGAATGGGGAA 3175648 >seq15 Length=10047770 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || |||||||| || || ||||| || | ||| | |||||| || || || || Sbjct 1769306 CACGCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTTAAA 1769365 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| || || ||||| | ||||||||| || ||| || || || ||| Sbjct 1769366 CCCGGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAAAAT 1769425 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGC 17121 || || || || | ||||| |||||||||||||||| Sbjct 1769426 ATGCCTTCCACACAAGCAAATCCGATTAATCGTTCGGC 1769463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517440564120480