Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq15 129 6e-25 >seq15 Length=10047770 Score = 129 bits (142), Expect = 6e-25 Identities = 380/580 (66%), Gaps = 13/580 (2%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 ||||| || ||||| || | || || || | ||| | ||||||||| |||||||| Sbjct 1769306 CACGCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTTAAA 1769365 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| || || ||||| | ||| ||||| ||| || ||||| || ||| Sbjct 1769366 CCCGGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAAAAT 1769425 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 || || || ||| | ||||| ||||||||||||| || | || || || || Sbjct 1769426 ATGCCTTCCACACAAGCAAATCCGATTAATCGTTCGGCAAAAGTTTCAGAGCCAT--CG- 1769482 Query 16382 ATCCATTTCTGTA---CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 ||||| ||| |||||| || || | | | ||| | || || || || Sbjct 1769483 ATCCA---GCGTAAAGCCCATTTAGCCTTCTTCTCCACACATGGGACAGTCTCGATTGCG 1769539 Query 16439 TTAAACAATTTCTCTTTTTC--CTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 ||| | | | || || | || ||| ||||||| | |||| || | ||| | Sbjct 1769540 CGAAAAAGCATGTTCTTCTCGGCCGA--ATCCTTTATATAGGATTCAAGCAAAAGACTAT 1769597 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556 |||| || || || |||||||| ||||| |||||||| ||||||||| |||||||| | Sbjct 1769598 ACATCTCGGAATGGATGTTCTCAATGGCAATCTGAAACCCATAGAAGGCACGAGCCTCGG 1769657 Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 | || |||||| || ||| | || |||||||| || || || ||| | Sbjct 1769658 AGACCTGAACTTCCTTCATGAAGCGTCCAGCAAGGTTCTCCAAAACAATGCCATCAGAGG 1769717 Query 16617 CAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCC 16676 | || || || || | | ||| || ||||||| || |||||||| || || | | || Sbjct 1769718 CGGCGAAGAAGGCGAGAACGTGTTTGATGAAATGCTTCTCGTCAGAAGTGAGGTTTTCCC 1769777 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 | | | |||| ||| | ||||||||| || | ||||| ||| || | || | Sbjct 1769778 AGTGGCGGAGGTCTTGGGACAAATCCACTTCCTCCGCAGTCCAGAAGGACGCTTCGGCTT 1769837 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | || ||||||| ||| || | ||| || ||||| || Sbjct 1769838 TCTTGTACATTTCCCAGATTTGTGGGTACTGGATGGGGAA 1769877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511310608447520