Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 6e-11 >seq3 Length=24928530 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 |||||||| || || || || || |||| ||||| | ||||| |||| | |||||| Sbjct 22618334 CAGTTTTATGTAGCCAATGGAGAGCTATCTTGCCAGATGTACCAACGATCTGCAGATATG 22618275 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 ||||||||||| ||||| |||||||| |||||| || | || | ||| | || ||| Sbjct 22618274 GGCCTTGGGGTGCCGTTTAACATTGCATCATATGCTCTATTGACATGCATGATTGCTCAT 22618215 Query 19122 GTT 19124 ||| Sbjct 22618214 GTT 22618212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399424947646620