Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq11 105 6e-18 seq5 96.9 3e-15 >seq11 Length=15446199 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| |||| |||||||| || ||| ||| ||| | || Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| |||||| || || ||||| | || ||||| Sbjct 13441914 GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCAG 13441973 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| | ||||| || || ||||||||||| ||| | |||| | ||||| |||||| Sbjct 13441974 CAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAAT 13442033 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||| |||||||| |||||||| ||||| | ||| | || || ||| Sbjct 13442034 ATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACTCCGCGGTGGG 13442081 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | ||||| |||||||||| || |||||| ||| || | | Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || ||||||| || |||||||| | || ||||||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || || || || ||||| || |||||||| | ||| |||||||||| ||| Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||||||||| || ||| | || |||| Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGT 13442290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| || | ||||| | || |||||||| ||||| |||| ||| || Sbjct 13444923 AAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGAAGTCGAAACC 13444982 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 |||| || | | | || ||||| || || || || ||||| | || ||| Sbjct 13444983 TCAGACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCACCGGAT 13445042 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || | || || || || || ||||| |||| ||| || ||| | ||||||||| Sbjct 13445043 CAGCAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCTAGCCGATTAC 13445102 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||||| || || ||| | || | ||| | || || || Sbjct 13445103 AATATTCAGAAGGAATCCACACTCCACCTCGTCCTCCGACTCCGCGGCGG 13445152 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || |||||||| || |||||||| ||| ||| ||| | Sbjct 13442310 ATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAAGTGGAGAGTTCG 13442369 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||| || ||||| ||||| | || ||| || Sbjct 13442370 GACACCATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAGACCAG 13442429 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||| |||||||| || || || || || ||| | |||| | || ||||| || Sbjct 13442430 CAGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTATAAC 13442489 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||| || |||||||| Sbjct 13442490 ATTCAGAAGGAGTCGACTCTTCA 13442512 >seq5 Length=18898134 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | || || | || || ||||| |||||| ||| ||| | || Sbjct 2599331 ATGCAAATATTTGTGAAGACTCTTACTGGTAAAACTATTACCCTGGAAGTTGAAAGCTCA 2599272 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || ||||||| || || || || | || ||| || Sbjct 2599271 GACACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 2599212 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| ||||||||||| || ||| | || |||| ||||||||| Sbjct 2599211 CAGAGATTGATCTTTGCTGGCAAACAACTTGAGGATGGAAGGACCTTGGCAGATTACAAT 2599152 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATT 29179 |||||||||||||| || || || | ||| | ||||| Sbjct 2599151 ATTCAGAAGGAATCGACCCTCCATCTTGTGCTGCGATT 2599114 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| ||||| || || |||||||| || || || Sbjct 2599103 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCA 2599044 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || ||| ||||| ||||| | || ||| ||| Sbjct 2599043 GACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAA 2598984 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || || || |||||| || ||| | || ||||| ||| Sbjct 2598983 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAAT 2598924 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||| || || ||||||||||| | || || ||||| |||| ||| Sbjct 2598923 ATTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGGG 2598876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428251242478580