Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq11 109 5e-19 seq5 91.5 1e-13 seq1 86.0 5e-12 seq6 84.2 2e-11 >seq11 Length=15446199 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || | ||||| |||| |||||||| || ||| ||| ||| | || Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||||| |||||| || || ||||| | || ||||| Sbjct 13441914 GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCAG 13441973 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| | ||||| || || |||||| |||| ||| | |||| | ||||| |||||| Sbjct 13441974 CAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAAT 13442033 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 |||||||||||||| |||||||| ||||| | ||| | || || ||| Sbjct 13442034 ATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACTCCGCGGTGGG 13442081 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| || | ||||| | || |||||||| ||||| |||| ||| || Sbjct 13444923 AAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGAAGTCGAAACC 13444982 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 |||| || | | | || | ||| || || || || ||||| | || ||| Sbjct 13444983 TCAGACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCACCGGAT 13445042 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || || | || || || || || ||||| ||||| ||| || ||| | ||||||||| Sbjct 13445043 CAGCAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCTAGCCGATTAC 13445102 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| |||||||| || || ||| | || | ||| | || || || Sbjct 13445103 AATATTCAGAAGGAATCCACACTCCACCTCGTCCTCCGACTCCGCGGCGG 13445152 >seq5 Length=18898134 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| ||||| || || |||||||| || || || Sbjct 2599103 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCA 2599044 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| || ||| ||||| ||||| | || ||| ||| Sbjct 2599043 GACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAA 2598984 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || | |||||||| || || || | |||||| || ||| | || ||||| ||| Sbjct 2598983 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAAT 2598924 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 |||||||| || ||||||||||| | || || ||||| |||| ||| Sbjct 2598923 ATTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGGG 2598876 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | || || | || || ||||| |||||| ||| ||| | || Sbjct 2599331 ATGCAAATATTTGTGAAGACTCTTACTGGTAAAACTATTACCCTGGAAGTTGAAAGCTCA 2599272 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || |||| ||||||| || || || || | || ||| || Sbjct 2599271 GACACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 2599212 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||| | |||||||| ||||||||| | || ||| | || |||| ||||||||| Sbjct 2599211 CAGAGATTGATCTTTGCTGGCAAACAACTTGAGGATGGAAGGACCTTGGCAGATTACAAT 2599152 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252 ||||| |||||||| || || || | ||| | ||||| Sbjct 2599151 ATTCAGAAGGAATCGACCCTCCATCTTGTGCTGCGATT 2599114 >seq1 Length=18577331 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | || || || || || || || ||||| || ||||| |||||| Sbjct 937478 GACAAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTGGAA 937537 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| || ||| | || ||||||||||||||||| ||||| || |||||| | || || Sbjct 937538 GATGGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAACACTTCACCTTGTTTTG 937597 Query 25248 CGATTACGAGGAGGG 25262 || | | |||||| Sbjct 937598 AGACTCAGGGGAGGG 937612 >seq6 Length=25289714 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || |||||||| | || ||| || || || || || ||||| || ||||| |||||| Sbjct 18207846 GACAAAGAAGGCATACCTCCAGACCAGCAGAGGCTAATATTTGCTGGTAAACAGTTGGAA 18207787 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 ||| || ||| |||| ||||||||||| ||||| ||||| || |||||| Sbjct 18207786 GATGGCAGAACCCTGGCGGATTACAATATCCAAAAAGAATCCACACTTCAC 18207736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410715513069704