Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq11 140 5e-28 seq5 123 4e-23 seq14 113 7e-20 seq1 104 4e-17 >seq11 Length=15446199 Score = 140 bits (154), Expect = 5e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| |||| || || || ||||| ||||| || | || |||| ||| Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTC- 13442140 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| ||| ||||| |||||||| || |||||||| || ||||| ||||| Sbjct 13442141 TGATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCA 13442200 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||||| ||||| || || || || || || ||| | | || | | |||||||| Sbjct 13442201 ACAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAA 13442260 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| || || || |||||||||||||| | | | || |||||||| Sbjct 13442261 TATTCAGAAGGAGTCGACTTTGCATTTGGTCCTGAGGCTGCGCGGTGGTAT 13442311 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| || || ||||| || |||||| | ||| | || Sbjct 13254533 ATGCAAATCTTTGTAAAGACCCTGACCGGCAAGACCATAACTCTCGAGGTCGAGAGTTCC 13254474 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| ||||| || ||||||||||||||||| || || |||||||| Sbjct 13254473 GATACTATTGATAATGTAAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAG 13254414 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | |||||||| ||||| || | || || | || || | | ||||| ||| Sbjct 13254413 CAAAGATTGATTTTTGCTGGAAAGCAGCTTGAAGACGGACGCACGCTTGCTGATTACAAT 13254354 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || ||| | ||| | || | ||| | || ||||| || Sbjct 13254353 ATCCAGAAGGAGTCCACTCTTCATCTTGTCCTTCGTCTTCGTGGTGGAAT 13254304 Score = 116 bits (128), Expect = 6e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| |||| || || || |||||||| || || | ||| | || ||| | Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || || | || |||||||| || || ||||| ||||| || ||||| Sbjct 13441914 -GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCA 13441972 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || || || ||||||||| | |||||| || |||| ||| || || || Sbjct 13441973 GCAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAA 13442032 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| ||| | |||||||| | || | || ||||| || Sbjct 13442033 TATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACTCCGCGGTGGGAT 13442083 Score = 113 bits (124), Expect = 7e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | ||||| | || || ||||| || ||| | ||| | || || | Sbjct 11225973 ATGCAAATTTTTGTTAAGACCTTGACTGGAAAAACAATCACTCTGGAGGTGGAGAGTTCA 11226032 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| |||| | || || |||||||| || || || || ||||| ||||| Sbjct 11226033 -GATACAATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGGATTCCACCAGATCA 11226091 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| |||| || ||||| || || || | |||||| | || ||| | | |||||||| Sbjct 11226092 ACAACGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACACTTGCCGATTATAA 11226151 Query 124718 TATTCAAAAAGAATCAACT 124736 ||| || ||||| |||||| Sbjct 11226152 TATCCAGAAAGAGTCAACT 11226170 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| ||||| |||||||| || ||| | ||| |||| ||| Sbjct 11224833 ATGCAGATCTTTGTGAAGACTCTAACTGGCAAAACCATCACTCTCGAGGTTGAGAGCTC- 11224891 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || ||||||||||| ||||| || || |||||||| Sbjct 11224892 TGATACTATTGACAATGTCAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCA 11224951 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| ||||| ||| | || ||| | ||||| | | |||||| || Sbjct 11224952 GCAGAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGCCGAACCCTTGCAGATTACAA 11225011 Query 124718 TATTCAAAAAGAATCAAC 124735 ||| || || || || || Sbjct 11225012 TATCCAGAAGGAGTCGAC 11225029 Score = 105 bits (116), Expect = 1e-17 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| || ||| | ||||| | ||||| ||||| || || | ||| | || || Sbjct 13253394 AATGCAGATCTTTGTCAAGACTTTGACAGGGAAAACAATCACCTTGGAGGTGGAGAGTTC 13253335 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | ||||| ||| |||| | || || |||||||| || || ||||| ||||| || | Sbjct 13253334 A-GATACTATTGATAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACC 13253276 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 |||||||||| || ||||| || || || | ||||| |||| || | | ||| || | Sbjct 13253275 AACAAAGGCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTTGCAGACTACA 13253216 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 | |||||||| || || ||| | || | ||| | || | ||||||||| Sbjct 13253215 ACATTCAAAAGGAGTCCACTCTTCACCTTGTTCTTCGACTCCGAGGTGGT 13253166 Score = 104 bits (114), Expect = 4e-17 Identities = 183/262 (70%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| ||||||| || || || || || || ||| | || ||||| Sbjct 11225516 AATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACGATTACTCTGGAAGTTGAAAGTTC 11225575 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||||||| ||| |||| || ||||| || || |||||||| || || ||||| | Sbjct 11225576 AGATACAATTGACAATGTTAAGGCA-AAAATCCAGGACAAAGAAGGAATCCCTCCTGACC 11225634 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | || ||||| || |||||| | || ||| | | || | | |||||| | Sbjct 11225635 AGCAGAGATTGATCTTTGCCGGTAAACAACTTGAAGATGGAAGGACGCTGGCAGATTACA 11225694 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAAT 124775 |||| || ||||||||||| | ||| | || | || || | ||||| || ||| || Sbjct 11225695 ATATCCAGAAAGAATCAACCCTTCATCTTGTGCTGCGGTTGAGGGGTGGAATGCAAATAT 11225754 Query 124776 TCATAAAAA--TTGATTGTAAA 124795 | | |||| |||| || ||| Sbjct 11225755 TTGTCAAAACTTTGACTGGAAA 11225776 Score = 93.3 bits (102), Expect = 6e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| | || || | || || || || || ||| ||||| |||| Sbjct 11225744 AATGCAAATATTTGTCAAAACTTTGACTGGAAAGACCATCACTTTAGAGGTTGAGAGTTC 11225803 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| | || ||| ||||| |||||||||||||| || || || || Sbjct 11225804 GGATACAATTGACAATGTTAAGGCGAAGATTCAGGATAAAGAAGGTATTCCTCCGGACCA 11225863 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || ||||| || || || | || ||| | |||| | | |||||||| Sbjct 11225864 GCAGCGCTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGAACTCTTGCTGATTATAA 11225923 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 || ||||| || |||||| | ||| | || || || Sbjct 11225924 CATCCAAAAGGAGTCAACTCTTCATCTTGTCTTGCG 11225959 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || || || || || ||| | ||| |||| Sbjct 13253621 ATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACCATTACTTTGGAGGTTGAGAGTTCG 13253562 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| || | || |||||||| || ||||||||||| || || || || Sbjct 13253561 GATACAATAGACAACGTCAAGGCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAG 13253502 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||| | |||||| || | ||| | | ||| || || Sbjct 13253501 CAACGATTGATCTTTGCTGGTAAACAGCTTGAGGATGGTAGGACACTTGCAGACTACAAC 13253442 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 || ||||| || |||||| | ||| |||| || || || Sbjct 13253441 ATCCAAAAGGAGTCAACTCTCCATCTGGTCTTGCGCTT 13253404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || || || || ||||| | ||| |||| ||| Sbjct 13254077 ATGCAGATTTTTGTTAAGACCTTGACGGGGAAGACCATAACATTGGAGGTTGAGAGCTCG 13254018 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||||| |||||||| ||||| || || |||||||| Sbjct 13254017 -GACACTATTGACAATGTTAAGGCCAAAATCCAAGATAAGGAAGGGATTCCCCCTGATCA 13253959 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| || || || | |||||| | | || | | || ||||| Sbjct 13253958 ACAGCGTTTGATTTTTGCTGGTAAGCAGCTCGAGGATGGCAGGACCCTCGCTGACTATAA 13253899 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||||||| || || || |||| |||| || Sbjct 13253898 TATTCAAAAGGAGTCGACACTGCACCTGGTGTT 13253866 >seq5 Length=18898134 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| | ||||| || || || ||| | ||| | ||| | Sbjct 2598875 ATGCAAATCTTTGTAAAGACTTTGACAGGGAAGACAATCACTTTGGAGGTGGAAAGCTCT 2598816 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| |||| | || |||||||| || || ||||| |||||||| ||||| Sbjct 2598815 GATACAATTGATAATGTGAAGGCAAAAATTCAGGACAAGGAAGGGATACCACCGGATCAG 2598756 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||| || |||||||| || || | || ||| | || || | | ||||||||| Sbjct 2598755 CAGCGGCTGATCTTTGCAGGGAAGCAGCTCGAAGATGGCCGTACCCTTGCAGATTATAAC 2598696 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || || ||||||||||| | || | ||| | || | || |||||| Sbjct 2598695 ATCCAGAAAGAATCAACCCTTCACCTTGTTCTTCGCCTCCGGGGTGGT 2598648 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTG-AAGCAAA 124597 |||||||||||| | ||||| || || || |||||||| || | || ||| |||| | Sbjct 2599331 ATGCAAATATTTGTGAAGACTCTTACTGGTAAAACTATTACCCTGGAAGTTGAAAGCTCA 2599272 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| |||||||| || || || || || || || || || Sbjct 2599271 -GACACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCA 2599213 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| || |||||| | |||||| | | || || | |||||| || Sbjct 2599212 GCAGAGATTGATCTTTGCTGGCAAACAACTTGAGGATGGAAGGACCTTGGCAGATTACAA 2599153 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| || ||||| || | ||| | || | || || | ||||| || Sbjct 2599152 TATTCAGAAGGAATCGACCCTCCATCTTGTGCTGCGATTGAGGGGTGGCAT 2599102 >seq14 Length=4882680 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || || ||||| || || || | || |||| ||| Sbjct 1410963 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTTGAGAGCTCC 1410904 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || || ||||||||||| || || || ||||| || || Sbjct 1410903 -GATACCATCGACAATGTGAAGGCCAAGATTCAAGATAAGGAGGGGATCCCACCAGACCA 1410845 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||||||||| ||||| || || |||||| | || || || | ||||| || Sbjct 1410844 GCAGAGGCTTATTTTTGCTGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCGGATTACAA 1410785 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || || |||| |||||| | | | || |||||||| Sbjct 1410784 CATTCAGAAAGAGTCTACCCTGCACTTGGTTCTGAGGCTCCGTGGTGGTAT 1410734 >seq1 Length=18577331 Score = 104 bits (114), Expect = 4e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || || |||||||||||||| ||||| || || ||||| |||||||| || ||||| || Sbjct 937475 CAGGACAAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTG 937534 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735 || ||| | |||| | | |||||| |||||||||||||||||||| Sbjct 937535 GAAGATGGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAAC 937581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755302680204800