Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq14 120 2e-22 seq6 109 4e-19 seq8 107 1e-18 seq11 105 4e-18 >seq14 Length=4882680 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || |||||||| |||| ||| | ||| |||||||| |||||||| || | | Sbjct 1410737 CCACCACGGAGCCTCAGAACCAAGTGCAGGGTAGACTCTTTCTGAATGTTGTAATCCGCC 1410796 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || ||| | || ||||||||||| || || ||||| |||| ||||||||| || Sbjct 1410797 AAGGTG-CGGCCATCCTCCAACTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGG 1410855 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || ||||| ||| | || | | || | ||||| || || Sbjct 1410856 GATCCCCTCCTTATCTTGAATCTTGGCCTTCACATTGTCGATGGTATCGGAGCTCTCAAC 1410915 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || |||||||||||||| Sbjct 1410916 TTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 1410963 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||| |||| ||| | ||| || ||||| ||||||||||||| Sbjct 1411420 TCCACCACGGAGTCGCAGGACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGC 1411479 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||||||||| ||||| || |||| ||||||||| ||| Sbjct 1411480 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGGGG 1411539 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | | | | || | || | ||| || Sbjct 1411540 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCCAC 1411599 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || ||||| ||||||||||| Sbjct 1411600 CTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1411647 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| ||| | ||| || ||||| ||||||||||||| Sbjct 1411648 TCCACCACGGAGACGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 1411707 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || |||| || | |||||| || ||||| || | || ||||||||| ||| Sbjct 1411708 GAGGGTGCGTCCGTCTTCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGG 1411767 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | | | | || | || | ||| || Sbjct 1411768 AATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCAC 1411827 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| || ||||||||||| |||||||||||| Sbjct 1411828 CTCAAGGGTGATGGTCTTGCCTGTAAGAGTTTTCACGAAGATCTGCATC 1411876 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| |||| ||| | ||| || ||||| ||||||||||||| Sbjct 1411193 CCTCCACGGAGACGCAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 1411252 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||| ||||| ||||| || | || ||||||||| ||| Sbjct 1411253 AGGGTGCGACCGTCCTCGAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGG 1411312 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | | || | |||| ||| || Sbjct 1411313 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACC 1411372 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 1411373 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||| || | ||| || ||||| ||||||||||| | Sbjct 1410965 CCACCACGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1411024 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | || || || ||||| || |||| ||||||||| ||| Sbjct 1411025 AGTGTTCGCCCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGG 1411084 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | ||||| Sbjct 1411085 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGACT 1411144 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| ||||| || || || || |||||||| Sbjct 1411145 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1411191 >seq6 Length=25289714 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| ||||||||||||| || ||| |||| Sbjct 179481 AGGACGAGGTGGAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCC 179422 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| ||||| ||||||||||| || | || |||||||| Sbjct 179421 TCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 179362 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||||| |||||||| || | || ||||| Sbjct 179361 TGGATCTTGGCCTTGACGTTGTCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTC 179302 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || ||||| || |||||||||||| Sbjct 179301 TTACCCGTTAGGGTTTTGACGAAGATCTGCATC 179269 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | ||| ||| | || || | ||| || || ||||| Sbjct 19867591 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCCTCGAGCTGTTTCCCGGCGAAG 19867532 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || |||||||| ||| | || ||||| || ||||| ||| | | | Sbjct 19867531 ATGAGACGTTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTG 19867472 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||||| ||||| || |||| || ||||| ||||| || || || ||||| Sbjct 19867471 TCGATGGTATCGGAGGATTCTACCTCCAAGGTTATGGTCTTGCCCGTAAGGGTCTTCACG 19867412 Query 34379 AAGATCTGCATC 34390 || ||||||||| Sbjct 19867411 AAAATCTGCATC 19867400 >seq8 Length=21523998 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||||||||| || | || || ||||| | || |||||||||||||||||||||||||| Sbjct 16226430 TCCGCCGCGTAGGCGGAGGACGAGGTGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGA 16226371 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || ||||| |||| ||||||||| ||||| || || || || ||||| || Sbjct 16226370 CAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGG 16226311 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 || | || || || || || ||| | || ||| | || || || || Sbjct 16226310 AACCCCTTCTTTTTCTTGAATTTTGGACTTCACATTTTCTACAGTGTCCGTACTCTCCAC 16226251 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| || |||||||| ||||| | || || || |||||||||||| Sbjct 16226250 ATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACGAAGATCTGCATC 16226202 >seq11 Length=15446199 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | || || ||||| |||||||| |||| | Sbjct 13441852 CCGCCTCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441793 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | |||||| || ||||| ||||| |||||||| || || Sbjct 13441792 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGA 13441733 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | |||| | || | || || Sbjct 13441732 ATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACC 13441673 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||| ||||| ||||| ||||||||||| |||||||||||| Sbjct 13441672 TCCAGCGTGATCGTTTTTCCGGTCAGAGTTTTCACGAAGATCTGCATC 13441625 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||||||||| || | || || ||||| | || ||| ||||| || ||||| |||| Sbjct 13445153 TCCGCCGCGGAGTCGGAGGACGAGGTGGAGTGTGGATTCCTTCTGAATATTGTAATCGGC 13445094 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | | | || |||||||| || || |||||||| || |||||||| || || Sbjct 13445093 TAGGGTTCTGCCATCCTCCAACTGTTTCCCAGCGAAAATCAGACGCTGCTGATCCGGTGG 13445034 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||||| ||||| ||| | || | | || | || | | |||||| Sbjct 13445033 AATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTGTCTGAGGTTTCGAC 13444974 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || || |||||||| || || |||||||||||||| |||||| Sbjct 13444973 TTCGAGAGTAATTGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCATC 13444925 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| |||||||| |||| | Sbjct 13441624 CCACCTCGCAGACGTAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441565 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | |||||| || ||||| ||||| |||||||| || || Sbjct 13441564 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCTGGCGGA 13441505 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | |||||| |||| || || Sbjct 13441504 ATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTTATCTATCGTGTCGGAACTCTCAACC 13441445 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||| ||||| || || || ||||||||||| ||||||||| Sbjct 13441444 TCCAGCGTGATCGTTTTTCCCGTTAGGGTTTTCACAAAAATCTGCATC 13441397 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||||||||| |||| || ||||| || ||||| || || || |||| | Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | || |||||||||||||| |||||||| |||| ||| || || || Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || ||||| || |||||| |||| || | | || | ||| | || || Sbjct 13442188 ATTCCTTCTTTGTCCTGAAT-TTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCAAC 13442130 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| || || || ||||| || || ||||| ||||| ||||||||| Sbjct 13442129 TTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCATC 13442081 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| |||||||| |||| Sbjct 13441396 CCACCGCGAAGACGGAGGACGAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCGGCA 13441337 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| || | |||||| || ||||| ||||| |||||||| || || Sbjct 13441336 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 13441277 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||| | | | || | ||||| ||||| Sbjct 13441276 ATTCCTTCCTTATCCTGGATCTTCGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 13441217 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || ||||| |||||||| | ||||||||||||||||||||| Sbjct 13441216 TCGAGGGTAATGGTCTTGCCGGTTAAGGTTTTCACAAAGATCTGCATC 13441169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323008071724160