Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 5e-13 >seq13 Length=5050363 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 ||||| ||||| || |||||||| | ||| ||||| |||||||| |||||||| ||| Sbjct 3176525 GACATGACTGATGCCTTCTGATATTCCCCAACCCTCTTCTCAAAGAAGTTTGTTTTCCCT 3176466 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAA--TAGTATTTATCGC 16046 | || ||| |||||| ||||||| ||||| | | ||| || | || | Sbjct 3176465 TGCAAACTAATCAATTCCATCCAATCAAATGGATTCT--GCACATGGTACAACTTTCCAT 3176408 Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 | ||||| | ||| | |||||| ||||||||||| || ||||| |||| ||||| | Sbjct 3176407 AGCCCAAAGCATTCAACAGTCTATCAGCCACAAATTCAATGTACTGGCTCATCAAATCTC 3176348 Query 16107 AGTTCATTCC 16116 ||||| || Sbjct 3176347 CATTCATCCC 3176338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462418133189600