Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq14 125 6e-24 seq11 120 2e-22 seq8 116 3e-21 seq6 91.5 1e-13 seq5 91.5 1e-13 >seq14 Length=4882680 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| |||||||||||| || ||| |||| Sbjct 1411664 AAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCT 1411723 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||||||||| || |||| ||| ||||| || || | || ||||||||| Sbjct 1411724 TCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCC 1411783 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || |||||| | | | ||||| || |||||||| | ||| || ||| Sbjct 1411784 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCACCTCAAGGGTGATGGTC 1411843 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| ||||| ||||| ||||| Sbjct 1411844 TTGCCTGTAAGAGTTTTCACGAAGATCTGCAT 1411875 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| || |||| |||| || Sbjct 1411211 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCG 1411270 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| ||||||| ||| ||||| || || | || ||||||||| Sbjct 1411271 AGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGG 1411330 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||||| | ||| || |||||| Sbjct 1411331 ATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTG 1411390 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| || |||||||| Sbjct 1411391 CCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||||||||||||||||| || ||| | || || Sbjct 1411439 ACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCG 1411498 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| |||| || ||| ||||| || || | || ||||||||| Sbjct 1411499 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGG 1411558 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||||| | ||| || |||||| Sbjct 1411559 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATTGTCTTG 1411618 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| ||||| ||||| Sbjct 1411619 CCGGTGAGGGTCTTCACGAAGATCTGCAT 1411647 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| ||||||||||| ||| || | || || Sbjct 1410983 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTTCGCCCATCCTCG 1411042 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || ||||| || | || ||| ||||| || || | |||||||||||| Sbjct 1411043 AGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1411102 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| || |||| ||| || |||||| Sbjct 1411103 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGACTTCCAGGGTGATGGTCTTG 1411162 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || || || |||||| Sbjct 1411163 CCAGTGAGGGTCTTGACGAAAATCTGCATG 1411192 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||| || ||||||||||| ||| | | || |||| || Sbjct 1410532 GTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTCCTTCCATCCTCCAACTG 1410591 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 |||||| ||||| ||||||| ||| ||||| || || | ||||||||||||| || || Sbjct 1410592 TTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTT 1410651 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | | ||| | ||| || || | ||| || ||||| || || Sbjct 1410652 TGCCTTGACGTTGTCAATGGTATCCGAGCTCTCAACTTCAAGGGTGATGGTCTTCCCTGT 1410711 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| || || ||||| Sbjct 1410712 AAGGGTCTTCACGAAAATCTGCAT 1410735 >seq11 Length=15446199 Score = 120 bits (132), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGT 45185 ||||| || || || ||||| ||||| ||||||||| | |||| | | | || | Sbjct 13442062 ACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTT--CTACCATCCT 13442005 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 ||||||||||||||||||| ||||||| || || ||||| || | || ||||||||| Sbjct 13442004 CCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTGTCCT 13441945 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 |||||| ||| || | | | |||| | ||||||||| | ||| || || | Sbjct 13441944 GAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGATTGTTT 13441885 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 |||| |||||||| || |||||||| ||||| ||||| Sbjct 13441884 TGCCGGTCAGAGTTTTTACAAAGATCTGCATCCCGCCTC 13441846 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || ||||| | || |||| || || || |||||| || ||||||||||| Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| | | | || || || ||||| || || || ||||| || || ||||| ||||| Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| || |||||| ||||||| ||| || | | | ||| || ||| ||| Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACC 13253574 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||||| ||||| || |||| ||||| |||||||| ||||| Sbjct 13253575 TCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45107 TCGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG 45166 || ||||||| | || | || | ||| || ||| |||||| |||||||||||||| Sbjct 13253164 TCACCACCTCGGAGTCGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCT 13253223 Query 45167 TTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || |||| |||| || || || || || || || || | || |||||||| || Sbjct 13253224 GCAAGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGTTGGTCTGGT 13253283 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | |||||||||||| ||| || ||| || | | | || || |||| Sbjct 13253284 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTATCAATAGTATCTGAACTCTCC 13253343 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||| || || || || |||| |||||| |||||||| ||||| Sbjct 13253344 ACCTCCAAGGTGATTGTTTTCCCTGTCAAAGTCTTGACAAAGATCTGCAT 13253393 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| || | || || | ||| |||||| ||||||||| |||||||| ||| | Sbjct 13441624 CCACCTCGCAGACGTAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441565 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | |||| || || || || |||||||| || | ||||| || || || | Sbjct 13441564 AAGGTT--CTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCTGGCG 13441507 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||||||||||| || || |||||| | | |||| || ||| | Sbjct 13441506 GAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTTATCTATCGTGTCGGAACTCTCAA 13441447 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| || ||||| || ||||| || || |||||||| || ||||| Sbjct 13441446 CCTCCAGCGTGATCGTTTTTCCCGTTAGGGTTTTCACAAAAATCTGCAT 13441398 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGTCCAGT 45190 ||| |||||| ||||||||| |||||||| ||| || ||| | |||| || || Sbjct 13441829 GTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTT--CTGCCGTCTTCGAGC 13441772 Query 45191 TGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATT 45250 || || |||||||| || | ||||| || || || || | ||||||||||| || Sbjct 13441771 TGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGAATTCCCTCCTTGTCTTGGATC 13441712 Query 45251 TTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCC 45310 || ||| || | | | |||| | ||||||||||| || ||||| || || Sbjct 13441711 TTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCCAGCGTGATCGTTTTTCCG 13441652 Query 45311 GTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||| ||||| ||||| Sbjct 13441651 GTCAGAGTTTTCACGAAGATCTGCAT 13441626 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || || ||||| || || || || ||||| | ||| ||||| ||||| | || |||||| Sbjct 11225443 TCTTCAAGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGAGGAATCCCTTCCTTG 11225384 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| |||||| |||||| | | | | || | ||| || |||| |||||| Sbjct 11225383 TCCTGGATTTTTGCCTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCCAGAGTAATC 11225324 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||| || || |||||||| || ||||| Sbjct 11225323 GTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 11225289 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || || |||||||| ||||| || ||||| | ||| ||||| ||||| | || || ||| Sbjct 11225671 TCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTCTTTG 11225612 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| |||||| |||||| | | | || || || || |||| |||||| Sbjct 11225611 TCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACTTCCAGAGTAATC 11225552 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || |||||||| ||||| || ||||| Sbjct 11225551 GTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 >seq8 Length=21523998 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||||| || ||||| |||||||||||| || ||| ||||| ||||| || Sbjct 16226406 GTGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTG 16226347 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||||||||||| || |||||||| ||||| || || || || || |||||| Sbjct 16226346 CTTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTT 16226287 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | || ||||| || |||||| |||| || || || || || || Sbjct 16226286 GGACTTCACATTTTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGT 16226227 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 16226226 CAAGGTCTTAACGAAGATCTGCAT 16226203 >seq6 Length=25289714 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| || ||| |||| || || || ||||||||||| Sbjct 179461 CTCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 179402 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| ||||| | || ||||||||| || || ||| || Sbjct 179401 GATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 179342 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || || ||||| | |||||| ||||| ||||| || || || || Sbjct 179341 GTCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGTTAGGGTTTTGAC 179282 Query 45325 AAAGATTTGCATGTT 45339 ||||| ||||| || Sbjct 179281 GAAGATCTGCATCTT 179267 >seq5 Length=18898134 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| ||||||| | || | || || || ||||||||||| ||||| || Sbjct 2599104 GCCACCCCTCAATCGCAGCACAAGATGGAGGGTCGATTCCTTCTGAATATTGTAATCTGC 2599163 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || | | || || |||||||| || || || ||||| | ||| ||||| ||||| Sbjct 2599164 CAAGGTCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGAGG 2599223 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| ||||||| || || | | |||| | || || Sbjct 2599224 AATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAAC 2599283 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||| || || || || |||||||||||||| |||||||| Sbjct 2599284 TTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGCAT 2599331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394997024000956