Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq11 113 3e-20 seq6 89.7 4e-13 seq1 87.8 1e-12 >seq11 Length=15446199 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || |||| ||||| || ||||| |||||||| ||||||||||| Sbjct 13442080 CCACCGCGGAGTCGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCT 13442021 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| ||| |||| |||||| || || |||| | ||||| ||||| || Sbjct 13442020 AGAGTTCTACCATCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGT 13441961 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||||| |||||| | | | ||||| | ||| Sbjct 13441960 ATCCCTTCCTTGTCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACC 13441901 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| |||||||||||| ||||||||||| || ||||| Sbjct 13441900 TCGAGGGTGATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 >seq6 Length=25289714 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| ||||| || || | ||||||||| ||||||||||| || ||||| || ||| Sbjct 18207713 CCTCCCCTGAGTCTCAGGACGAGGTGAAGTGTGGATTCTTTTTGGATATTGTAATCCGCC 18207772 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||||||||| ||||| || ||| | || || || || || || || Sbjct 18207773 AGGGTTCTGCCATCTTCCAACTGTTTACCAGCAAATATTAGCCTCTGCTGGTCTGGAGGT 18207832 Query 18219 ACGCCTTCCTTATC 18232 | |||||| || || Sbjct 18207833 ATGCCTTCTTTGTC 18207846 >seq1 Length=18577331 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| ||||| | || | |||||||||||||||||||||||| ||||| || || Sbjct 937611 CCTCCCCTGAGTCTCAAAACAAGGTGAAGTGTTGATTCTTTTTGAATATTGTAATCTGCA 937552 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | ||| | | ||||||||| ||||| || ||| | || || || || || || Sbjct 937551 AGGGTTCTGCCATCTTCCAACTGTTTACCAGCAAAAATGAGCCTCTGCTGGTC 937499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379268936831820