Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq8 105 6e-18 seq11 91.5 1e-13 >seq8 Length=21523998 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || ||||| ||||| ||||| ||||| ||||| | ||||| || | Sbjct 16226203 ATGCAGATCTTCGTTAAGACCTTGACCGGAAAAACCATAACTCTGGATGTGGAGAGTACG 16226262 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| |||||||| ||| ||| |||||| | ||||||||| || || ||||| Sbjct 16226263 GACACTGTAGAAAATGTGAAGTCCAAAATTCAAGAAAAAGAAGGGGTTCCTCCGGACCAA 16226322 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | |||| || ||||| || |||||||| ||| || ||| |||| | Sbjct 16226323 CAACGACTGATATTCGCCGGCAAGCAGCTGGAAGACGAACGCACTTTGTCCGACTACAAC 16226382 Query 25012 ATACAGAAAGA 25022 ||||||||||| Sbjct 16226383 ATACAGAAAGA 16226393 >seq11 Length=15446199 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| | ||||||||||| || ||| |||| || || |||| Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGA---GAGC 13441910 Query 24892 ---GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 |||| |||| | || |||| |||||| | || ||||| ||||| || Sbjct 13441911 TCAGACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGAT 13441970 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 |||||| | || || | || || ||||||||||| ||| | ||| | ||| ||| Sbjct 13441971 CAGCAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTAC 13442030 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 | || || || || | || |||||||| ||| | ||| | ||||| || Sbjct 13442031 AATATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACTCCGCGGTGG 13442080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418221227573120