Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5 111 2e-19 seq11 104 2e-17 seq14 100 3e-16 seq1 82.4 8e-11 >seq5 Length=18898134 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || |||||||||| |||| ||||||||||||||||| |||||||| Sbjct 2598877 CCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGCA 2598936 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| ||||| ||||||||| |||||| || || || || ||||| Sbjct 2598937 AGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGGTCTGGAGGA 2598996 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| || || ||| | || | || | | || | |||||| | ||| || Sbjct 2598997 ATGCCTTCCTTATC-CTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAACTCTCAAC 2599055 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||| || ||||| ||||| || || || ||||| Sbjct 2599056 CTCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Score = 105 bits (116), Expect = 7e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 139531 GACATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATA 139590 || ||| || || || | || | ||| | ||||| || || ||||| || |||||||| Sbjct 2598642 GAAATGACCACCCCGGAGGCGAAGAACAAGGTGAAGGGTTGATTCTTTCTGGATGTTATA 2598701 Query 139591 ATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATC 139650 ||| | || | ||||||||||| || || ||| ||||||| || |||||||| Sbjct 2598702 ATCTGCAAGGGTACGGCCATCTTCGAGCTGCTTCCCTGCAAAGATCAGCCGCTGCTGATC 2598761 Query 139651 GGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGG 139709 || ||||| ||||| ||||| ||| |||||| || | | || | ||| || | | Sbjct 2598762 CGGTGGTATCCCTTCCTTGTC-CTGAATTTTTGCCTTCACATTATCAATTGTATCAGAGC 2598820 Query 139710 GCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| | || | ||||| || ||||| || ||||| || |||||||| Sbjct 2598821 TTTCCACCTCCAAAGTGATTGTCTTCCCTGTCAAAGTCTTTACAAAGATTTGCAT 2598875 >seq11 Length=15446199 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | |||| || ||||| ||||| ||||||||||| | || || Sbjct 11225959 CGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGAGTTCTGCCA 11225900 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| ||||||||| |||||| || ||||| || ||||| || |||||||| Sbjct 11225899 TCTTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATACCTTCTTTA 11225840 Query 139670 TCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | ||| | | || | ||| || | ||| ||||| | || | Sbjct 11225839 TCC-TGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCAACCTCTAAAGTGAT 11225781 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || ||||| ||||| || ||||||||||| Sbjct 11225780 GGTCTTTCCAGTCAAAGTTTTGACAAATATTTGCAT 11225745 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | ||| | || | ||| | ||| ||||| || || ||||| |||||| | Sbjct 13441852 CCGCCTCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441793 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||||||||| || || || |||| || || |||||||| || || Sbjct 13441792 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGA 13441733 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | ||||| | | ||||||| Sbjct 13441732 ATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACC 13441673 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||| || ||||||| ||||| ||||| || ||||| Sbjct 13441672 TCCAGCGTGATCGTTTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 13441626 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || ||||| ||||||||| || || || ||||| | ||| || ||| Sbjct 13442278 GTCGACTCCTTCTGAATATTATAATCGGCCAGAGTCCTTCCATCTTCCAACTGCTTGCCA 13442219 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 || | ||||| | || ||||| || || || ||||||||||| ||| |||||| ||| Sbjct 13442218 GCGAAAATCAGCCTCTGTTGATCTGGTGGAATTCCTTCTTTGTC-CTGAATTTTTGCTTT 13442160 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 || | || | ||| || | | ||| || || | ||| | |||||||| |||| || Sbjct 13442159 TACATTGTCAATTGTATCAGAGCTCTCAACTTCCAGGGTAATAGTCTTGCCCGTCAGGGT 13442100 Query 139747 TTTTACGAATATTTGCAT 139764 |||||| || || ||||| Sbjct 13442099 TTTTACAAAAATCTGCAT 13442082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || ||||| || | || | || ||||| ||||| ||||| || || | ||| || Sbjct 13253404 AAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCAAGTGTCCTA 13253463 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 || || ||||||||||||||| |||||| |||||||| || ||||| || |||||| Sbjct 13253464 CCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGAATACCTTCT 13253523 Query 139667 TTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGT 139725 ||||| ||| |||||| || | | || | ||| || | ||| ||||| | || Sbjct 13253524 TTGTC-CTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACCTCCAAAGT 13253582 Query 139726 CACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | ||||| || ||||| || || || || || ||||| Sbjct 13253583 AATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || || |||| || || || |||||||| || || ||| | || || Sbjct 13442068 CGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCA 13442009 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || || ||||| || || |||||| | |||||||||||| ||||| ||||| ||| Sbjct 13442008 TCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTG 13441949 Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| |||| | || | | || | ||||| | | ||||||||| | ||| | Sbjct 13441948 TC-CTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGAT 13441890 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || |||||||||| |||||||| || || ||||| Sbjct 13441889 TGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| || || || || ||||| | |||| |||||| ||||| Sbjct 13254331 TGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTGCGTCCGTCTTCAAGCTGC 13254390 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | |||| | ||||||||| ||||| || |||||||| || ||| | || Sbjct 13254391 TTTCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT-TGAATCTT 13254449 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | ||||| | || | || |||| ||| ||||| | || | ||||||||||| Sbjct 13254450 AGCTTTTACATTATCAATAGTATCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCGGT 13254509 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 || || ||||| || |||||||| Sbjct 13254510 CAGGGTCTTTACAAAGATTTGCAT 13254533 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| ||| || || || || ||||| |||||| Sbjct 13441396 CCACCGCGAAGACGGAGGACGAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCGGCA 13441337 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||| |||||||| || || || |||| ||||| |||||||| ||||| Sbjct 13441336 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 13441277 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| || || | | || | || |||| | ||| || Sbjct 13441276 ATTCCTTCCTTATCCTGGATCTTCGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 13441217 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| || ||||| || || || ||||| Sbjct 13441216 TCGAGGGTAATGGTCTTGCCGGTTAAGGTTTTCACAAAGATCTGCAT 13441170 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| || |||||||||||||| | || ||| || || ||||| Sbjct 13442512 TGAAGAGTCGACTCCTTCTGAATGTTATAATCAGCGAGAGTTCTCCCATCCTCAAGCTGC 13442453 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 ||||||||| ||||||| | ||||| || || || |||||||| || || ||| ||| Sbjct 13442452 TTACCAGCAAAGATCAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGGATCTTT 13442393 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||| | |||||| || | ||| | || || || ||| Sbjct 13442392 GCCTTGACATTATCAATGGTGTCCGAACTCTCCACTTCCAGGGTGATGGTTTTTCCTGTC 13442333 Query 139742 AACGTTTTTACGAATATTTGCATA 139765 || || || ||||| || |||||| Sbjct 13442332 AATGTCTTCACGAAAATCTGCATA 13442309 >seq14 Length=4882680 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || ||||| | |||||||| || || ||||| || ||| Sbjct 1411192 GCCTCCACGGAGACGCAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 1411251 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||| ||||||||||| ||||| |||||| | ||||| || || || Sbjct 1411252 AAGGGTGCGACCGTCCTCGAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGG 1411311 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||||| | ||||| Sbjct 1411312 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCAC 1411371 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | |||||||| || | || || ||||| |||||||| Sbjct 1411372 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || ||||| | |||||||| || |||||||| || ||| | |||| Sbjct 1411433 CGCAGGACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCA 1411492 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || ||||| ||||||| | ||||| || || || || ||||| ||| Sbjct 1411493 TCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTG 1411552 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| | | |||||||||| ||| | Sbjct 1411553 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATT 1411612 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | || || ||||| || ||||| Sbjct 1411613 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 1411647 >seq1 Length=18577331 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 |||||| | ||||| || || ||||||||||| || ||||| | || || || Sbjct 937597 CAAAACAAGGTGAAGTGTTGATTCTTTTTGAATATTGTAATCTGCAAGGGTTCTGCCATC 937538 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||| | ||||||||||||| | || || | ||||| || |||||||| ||||||||||| Sbjct 937537 TTCCAACTGTTTACCAGCAAAAATGAGCCTCTGCTGGTCAGGAGGTATACCTTCTTTGTC 937478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495963323811200