Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 seq8 89.7 5e-13 seq6 86.0 6e-12 seq1 82.4 8e-11 >seq11 Length=15446199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| | || ||||| || | ||| | || || || ||||| |||||||| || Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || || || || |||||||||||| |||||| |||||||| || ||||| Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||||||| || | | || | || |||| || || Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACC 13253574 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | ||||| || ||||| || || || || || ||||| Sbjct 13253575 TCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026 || |||| || | ||||| || |||||||| || || |||||||| || || || Sbjct 11225734 AACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCCAGCGTCCTT 11225675 Query 143027 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 143086 ||||| ||||||||||| ||| |||||| | ||||| || ||||| || |||||| Sbjct 11225674 CCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTCT 11225615 Query 143087 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTC 143146 ||||| |||||| || | | || | || || | ||| ||||| | ||| Sbjct 11225614 TTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACTTCCAGAGTA 11225555 Query 143147 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | |||||| || || | || ||||| || || ||||| Sbjct 11225554 ATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || ||||||| || ||||| ||||| || ||||| ||| | || || Sbjct 13442068 CGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCA 13442009 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || || |||||||| || || |||||| | |||||||||||| ||||| ||||| ||| Sbjct 13442008 TCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTG 13441949 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| || | | || | ||||| | | || || || | || | Sbjct 13441948 TCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGATT 13441889 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || |||||||||| |||||||| || || ||||| Sbjct 13441888 GTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || | ||||| || || || ||||| ||||| ||||| | || || Sbjct 11225959 CGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGAGTTCTGCCA 11225900 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || || ||||||||| |||||| || ||||| || ||||| || |||||||| Sbjct 11225899 TCTTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATACCTTCTTTA 11225840 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || || | | || | || |||| || || || | ||| | Sbjct 11225839 TCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCAACCTCTAAAGTGATG 11225780 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || ||||| ||||| || ||||||||||| Sbjct 11225779 GTCTTTCCAGTCAAAGTTTTGACAAATATTTGCAT 11225745 >seq8 Length=21523998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 142993 TTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATA 143052 |||||| ||||||||||| ||| || |||| |||||| || || || || || | Sbjct 16226394 TTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAA 16226335 Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112 ||||| ||||| || || ||||| | |||||||| || |||||| || | | Sbjct 16226334 TATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTCACATT 16226275 Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172 ||| || |||||||| || || || | ||| | || || |||||||| || || || Sbjct 16226274 TTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAAC 16226215 Query 143173 GAATATTTGCAT 143184 ||| || ||||| Sbjct 16226214 GAAGATCTGCAT 16226203 >seq6 Length=25289714 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||| ||||||||||| || |||||||| || || || ||||| | ||| Sbjct 18207737 TGAAGTGTGGATTCTTTTTGGATATTGTAATCCGCCAGGGTTCTGCCATCTTCCAACTGT 18207796 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||||||||| | || || | ||||| || |||||||||||||||||||| Sbjct 18207797 TTACCAGCAAATATTAGCCTCTGCTGGTCTGGAGGTATGCCTTCTTTGTC 18207846 >seq1 Length=18577331 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 |||||| | |||| ||| ||||||||||| || |||||||| | || || || Sbjct 937597 CAAAACAAGGTGAAGTGTTGATTCTTTTTGAATATTGTAATCTGCAAGGGTTCTGCCATC 937538 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||| | |||||||||||| | || || | ||||| || |||||||| ||||||||||| Sbjct 937537 TTCCAACTGTTTACCAGCAAAAATGAGCCTCTGCTGGTCAGGAGGTATACCTTCTTTGTC 937478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506911501427520