Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-25 seq11 116 3e-21 seq8 105 5e-18 seq14 98.7 7e-16 >seq5 Length=18898134 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||| ||||||| |||||| || || |||||||| || || ||||| Sbjct 2598877 CCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGCA 2598936 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | || | ||||| | || || ||||| | ||||| || |||||||| ||| Sbjct 2598937 AGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGGTCTGGAGGA 2598996 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||| ||| ||| ||| | || || || || | | || || Sbjct 2598997 ATGCCTTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAACTCTCAACC 2599056 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||||||| || || |||| ||||| |||||||| ||||| Sbjct 2599057 TCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Score = 105 bits (116), Expect = 5e-18 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193 ||||||| ||||||| | || | ||| ||||| || || || || || |||||||| | Sbjct 2599103 TGCCACCCCTCAATCGCAGCACAAGATGGAGGGTCGATTCCTTCTGAATATTGTAATCTG 2599162 Query 15194 CTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253 | || | || | || || | |||||||||||| | ||||| | || ||||| Sbjct 2599163 CCAAGG-TCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGA 2599221 Query 15254 GGAATTCCTTCTTTGT-CACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTC 15312 ||||| || || |||| | || ||||||| || ||| | || || || || |||| Sbjct 2599222 GGAATCCCCTCCTTGTCCTGAATTTTTGCT-TTGACATTGTCAATTGTGTCTGAGCTTTC 2599280 Query 15313 TACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | |||||| |||||||| || ||||| || ||||| |||||||| Sbjct 2599281 AACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGCAT 2599331 >seq11 Length=15446199 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || |||||||| || || || ||||| || ||||| ||| |||| |||| | || || Sbjct 13442062 ACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCATCCTCC 13442003 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||| || ||| | ||||| | ||| || ||| || || ||||| ||||| | Sbjct 13442002 AGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTGTCCTGA 13441943 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| || | |||||||| || | || || || | ||| || ||||| Sbjct 13441942 ATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGATTGTTTTG 13441883 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||||||||||||||| || ||||| Sbjct 13441882 CCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | || || | || ||||| | || || || || || || || |||||| Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | || | ||||| || || ||||||||| | |||| | ||||| || |||| Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| |||||| ||| |||||| | || || ||||| | || || Sbjct 13442188 ATTCCTTCTTTGTCCTGAATTTTTGCT-TTTACATTGTCAATTGTATCAGAGCTCTCAAC 13442130 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | |||||| || || || ||||| |||||||||||||| ||||| Sbjct 13442129 TTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| ||||| | | || | ||||||||| || ||||| || || |||||||| Sbjct 11225743 CCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCC 11225684 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | || | ||||| | |||||| || || | ||||| | || ||||| || Sbjct 11225683 AGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGG 11225624 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| ||||| ||| ||| | || || ||||| | |||| || Sbjct 11225623 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACT 11225564 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||||| || ||||| || ||||| ||||||||||| ||||| Sbjct 11225563 TCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || ||||| || || || || ||||||||| ||| |||| | || || || ||| Sbjct 13445128 TGGAGTGTGGATTCCTTCTGAATATTGTAATCGGCTAGGGTTCTGCCATCCTCCAACTGT 13445069 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || |||||| | |||| ||| || || || |||||||||||| ||||| || ||| Sbjct 13445068 TTCCCAGCGAAAATCAGACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTTG 13445009 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || |||| || || | ||||| ||||| || || Sbjct 13445008 GCCTTAACATTGTCGATGGTGTCTGAGGTTTCGACTTCGAGAGTAATTGTTTTGCCAGTT 13444949 Query 15341 AGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| ||||| |||||||| || Sbjct 13444948 AGGGTTTTCACAAAGATTTGCATCTT 13444923 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || || ||||| | || || | ||| || || || || ||||| |||||||| || Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | || | || || | ||||| ||||| | ||||| ||||| ||||| ||| Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| |||||| ||| || | ||||| ||||| | | || || Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACC 13253574 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| || || |||| || || ||||| || ||||| Sbjct 13253575 TCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 98.7 bits (108), Expect = 7e-16 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||| ||||| || || || || |||||||| || | | ||||||| | || Sbjct 13254330 ATGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTGCGTCCGTCTTCAAGCTG 13254389 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278 || ||||| | ||||| | ||| || || |||||||||||||| || ||| || Sbjct 13254390 CTTTCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATCTT 13254449 Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| |||||| | || || |||||| | | || || || | || ||||| || || | Sbjct 13254450 AGCT-TTTACATTATCAATAGTATCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCGG 13254508 Query 15339 TCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAA 15376 |||| || |||||||| |||||||| | |||| ||| Sbjct 13254509 TCAGGGTCTTTACAAAGATTTGCATCTACAAAAACAAA 13254546 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| || ||||| | | || ||||| ||||| || ||||| || ||||||||||| Sbjct 13254077 TGCCTCCCCTCAAACGCAGCACCAAATGCAGGGTCGATTCTTTCTGGATGTTGTAATCTG 13254136 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | || | || || | ||| || || || | ||||| | || ||||| | Sbjct 13254137 CAAGGGTCCTGCCATCCTCAAGTTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCTGGAG 13254196 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||| ||||| |||||| ||| ||| | || || |||||| |||| | Sbjct 13254197 GAATCCCTTCCTTGTCCTGAATTTTCGCCTTGACATTATCAATCGTATCGGAGCTTTCCA 13254256 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | ||| || || || ||||| || || || ||||| || ||||| Sbjct 13254257 CTTCCAGGGTTATAGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 13254305 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| ||||| || || || |||||||||||| || |||| |||| || | || Sbjct 13441372 TGAAGCGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTGC 13441313 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | || | ||| || || || ||||||||||| || || || || Sbjct 13441312 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGGATCTTC 13441253 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || ||||||||| | || || || | ||||||||| || || || Sbjct 13441252 GCCTTGACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGGGTAATGGTCTTGCCGGTT 13441193 Query 15341 AGAGTTTTTACAAAAATTTGCATATT 15366 | ||||| ||||| || ||||| || Sbjct 13441192 AAGGTTTTCACAAAGATCTGCATCTT 13441167 >seq8 Length=21523998 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||| ||||| ||||||||||| ||| | | | | ||||||| | || Sbjct 16226405 TGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGC 16226346 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| |||||| ||||||||||| |||| |||||||| || ||||||| Sbjct 16226345 TTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTG 16226286 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| |||||| || || || | || ||||| | || |||||||| || ||| Sbjct 16226285 GACTTCACATTTTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTC 16226226 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | || || || || || ||||| Sbjct 16226225 AAGGTCTTAACGAAGATCTGCAT 16226203 >seq14 Length=4882680 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || ||||| || || || || |||||||| ||| || | | |||| || Sbjct 1411211 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCG 1411270 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||||||||| | ||||| | || ||||| || |||||||| ||||| Sbjct 1411271 AGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGG 1411330 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || ||||| ||| |||| || || | ||| ||||| || Sbjct 1411331 ATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTG 1411390 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || || || || ||||||||||| Sbjct 1411391 CCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || |||||||| || || || || |||||||| ||| || | | ||||| Sbjct 1411664 AAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCT 1411723 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | || || || ||| | || || | || ||||| ||||||||||| ||||| Sbjct 1411724 TCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCC 1411783 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| || | || ||||| || | |||| || || | ||| ||||| Sbjct 1411784 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCACCTCAAGGGTGATGGTC 1411843 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| |||||||| || || || ||||| Sbjct 1411844 TTGCCTGTAAGAGTTTTCACGAAGATCTGCAT 1411875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362107533338076