Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq14 113 2e-20 seq8 111 8e-20 seq4 109 3e-19 seq122 107 1e-18 seq11 107 1e-18 seq1 107 1e-18 seq15 105 3e-18 seq2346 100 1e-16 seq5 98.7 5e-16 >seq14 Length=4882680 Score = 113 bits (124), Expect = 2e-20 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||| | |||| ||||||||| | | |||||||| ||||||||||||||| Sbjct 2920104 AAGTAATAAAAA-TAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 2920162 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| ||||||| ||||||||||||||| |||| |||| Sbjct 2920163 TAGCACAACGCTCTAACCAACTGAGCTAATAGGCCTTCGA 2920202 Score = 113 bits (124), Expect = 2e-20 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||| | |||| ||||||||| | | |||||||| ||||||||||||||| Sbjct 2920868 AAGTAATAAAAA-TAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 2920926 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| ||||||| ||||||||||||||| |||| |||| Sbjct 2920927 TAGCACAACGCTCTAACCAACTGAGCTAATAGGCCTTCGA 2920966 Score = 113 bits (124), Expect = 2e-20 Identities = 84/98 (86%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||||| | || ||||||||| | | |||||||| ||||||||||||||| Sbjct 2924214 AAGTAATAAAAAATAACATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 2924273 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||| ||||| ||||||||||||||| |||| || Sbjct 2924274 TAGCACGATGCTCTAACCAACTGAGCTAATAGGCCTTC 2924311 Score = 113 bits (124), Expect = 2e-20 Identities = 86/100 (86%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||| | |||| ||||||||| | | |||||||| ||||||||||||||| Sbjct 2933914 AAGTAATAAAAA-TAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 2933972 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| ||||||| ||||||||||||||| |||| |||| Sbjct 2933973 TAGCACAACGCTCTAACCAACTGAGCTAATAGGCCTTCGA 2934012 Score = 111 bits (122), Expect = 8e-20 Identities = 80/92 (87%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||| |||| ||||||||| | | |||||||| ||||||||||||||||||||| | Sbjct 2934664 AAAAATAAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACAA 2934723 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| ||||||||||||||| |||| |||| Sbjct 2934724 CGCTCTAACCAACTGAGCTAATAGGCCTTCGA 2934755 Score = 100 bits (110), Expect = 1e-16 Identities = 81/98 (83%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 || ||||||||||| | || ||||||||| | | | |||| | ||||||| ||||||| Sbjct 2931122 AAGTAATAAAAAATAACATAATGGCCCATGCAGGTCTTGAACTTGCGACCTTTGCGTTAT 2931181 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||| ||||||| ||||||||||||||| |||| || Sbjct 2931182 TAGCACAACGCTCTAACCAACTGAGCTAATAGGCCTTC 2931219 Score = 96.9 bits (106), Expect = 2e-15 Identities = 80/97 (82%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 || ||||||||| | || | | ||||||| | | || ||||| |||||||||||||||| Sbjct 2925710 AAATAATAAAAATAACATAATTGCCCATGCAGGTCTCAAACCTGCGACCTTCGCGTTATT 2925769 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||| |||| ||||||| ||||||| |||| || Sbjct 2925770 AGCACGACACTCTAACCAACTAAGCTAATAGGCCTTC 2925806 Score = 93.3 bits (102), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 || ||||||||| | || | | ||||||| | | || || || |||||||||||||||| Sbjct 2932617 AAATAATAAAAATAACATAATTGCCCATGCAGGTCTCAAATCTGCGACCTTCGCGTTATT 2932676 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||| |||| ||||||| ||||||| |||| || Sbjct 2932677 AGCACGACACTCTAACCAACTAAGCTAATAGGCCTTC 2932713 Score = 82.4 bits (90), Expect = 4e-11 Identities = 79/99 (80%), Gaps = 5/99 (5%) Strand=Plus/Plus Query 11437 AATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATC--GAACCTTCGACCTTCGCGTTA 11493 || ||||||||| | || | ||| ||||| | |||| |||| | |||| ||||| ||| Sbjct 2929317 AAATAATAAAAATAGCATAATGGTCCATGCA--GATCTTGAACTTGCGACTTTCGCATTA 2929374 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||| | ||||| ||||||||||||||| |||| || Sbjct 2929375 TTAGCACAATGCTCTAACCAACTGAGCTAATAGGCCTTC 2929413 >seq8 Length=21523998 Score = 111 bits (122), Expect = 8e-20 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 3089906 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 3089847 Query 11512 CAACTGAGCTAATGGGCCGTCGA 11534 ||||||||||||| |||||| || Sbjct 3089846 CAACTGAGCTAATAGGCCGTTGA 3089824 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3087897 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3087838 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 3087837 TGAGCTAATAGGCC 3087824 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 15704220 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15704279 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 15704280 TGAGCTAATAGGCC 15704293 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | || ||||| ||||||||||||||||||||||||||||| || Sbjct 6140284 AAAATGGCCCATGCAGGTCTCAAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 6140343 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 6140344 CAACTGAGCTAATAGGCC 6140361 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 742437 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGATGCTCTAACCAAC 742496 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 742497 TGAGCTAATAGGCC 742510 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct 2683520 TGGCCCATGTAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACAACGCTCTAACCAAC 2683461 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2683460 TGAGCTAATAGGCC 2683447 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct 19830581 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGTTCTAACCAAC 19830640 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 19830641 TGAGCTAATAGGCC 19830654 >seq4 Length=17356267 Score = 109 bits (120), Expect = 3e-19 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| || ||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 3174086 AAAATTAATGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 3174027 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||||| |||| Sbjct 3174026 TCTAACCAACTGAGCTAATAGGCC 3174003 Score = 109 bits (120), Expect = 3e-19 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 15209322 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15209263 Query 11516 TGAGCTAATGGGCCGTCGACGATTGTGATTTT 11547 ||||||||| |||| || | || ||||||| Sbjct 15209262 TGAGCTAATAGGCCATCTCTGTTTATGATTTT 15209231 >seq122 Length=74882 Score = 107 bits (118), Expect = 1e-18 Identities = 81/95 (85%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 || ||| ||||||| | ||||||||| | | |||||||| |||||||||||||||| Sbjct 18198 GAGTTATTAAAAAAGATA--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 18141 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||| ||||||||||||||| ||||| Sbjct 18140 AGCACGACGCTCTAACCAACTGAGCTAATAGGCCG 18106 >seq11 Length=15446199 Score = 107 bits (118), Expect = 1e-18 Identities = 78/90 (87%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 15316918 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15316859 Query 11516 TGAGCTAATGGGCCGTCGACGATTGTGATT 11545 ||||||||| |||| | || || ||| ||| Sbjct 15316858 TGAGCTAATAGGCC-TTGATGACTGTAATT 15316830 >seq1 Length=18577331 Score = 107 bits (118), Expect = 1e-18 Identities = 86/103 (83%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||| |||||| ||||| ||||||| | | | |||||||| |||||||||||||||||| Sbjct 10316917 TTAGTAAAAACACAAATATGGCCCAAGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAG 10316858 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTG 11540 ||||| ||||| ||||||||||||||| |||| | | ||||| Sbjct 10316857 CACGATGCTCTAACCAACTGAGCTAATAGGCCATTGTTGATTG 10316815 >seq15 Length=10047770 Score = 105 bits (116), Expect = 3e-18 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||| ||||| |||| Sbjct 3451825 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGATGCTCTAACCA 3451766 Query 11514 ACTGAGCTAATGGGCCGTCGACGATTG 11540 ||||||||||| |||| | | ||||| Sbjct 3451765 ACTGAGCTAATAGGCCATTGTTGATTG 3451739 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 2334168 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGATGCTCTAACCAAC 2334227 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2334228 TGAGCTAATAGGCC 2334241 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 7487106 AAAAAATTATGATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 7487165 Query 11504 GCTCTRACCAACTGAGC 11520 ||||| ||||||||||| Sbjct 7487166 GCTCTAACCAACTGAGC 7487182 >seq2346 Length=909 Score = 100 bits (110), Expect = 1e-16 Identities = 86/106 (81%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 ||| | | || ||||||||||| | || ||||||||| | | | |||| | ||||||| Sbjct 186 AAAAAAAAAAGTAATAAAAAATAACATAATGGCCCATGCAGGTCTTGAACTTGCGACCTT 127 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||||||||||| ||||||| ||||||||||||||| |||| || Sbjct 126 TGCGTTATTAGCACAACGCTCTAACCAACTGAGCTAATAGGCCTTC 81 >seq5 Length=18898134 Score = 98.7 bits (108), Expect = 5e-16 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 13469624 AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 13469565 Query 11512 CAACTGAGCTA 11522 ||||||||||| Sbjct 13469564 CAACTGAGCTA 13469554 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261439457101936