Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq14 149 1e-31 seq5 141 1e-29 seq7 138 2e-28 seq12 136 6e-28 seq9 131 3e-26 seq8 127 3e-25 seq11 122 1e-23 seq4 96.9 5e-16 >seq14 Length=4882680 Score = 149 bits (164), Expect = 1e-31 Identities = 177/240 (74%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || || |||||||| || || || || |||||||| |||||| Sbjct 364389 CTGCGGGACAACATCCAGGGCATTACCAAGCCGGCGATTCGCCGCCTGGCTCGCCGTGGT 364330 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| || || | |||| || |||| ||||| |||||||||||| ||| Sbjct 364329 GGCGTTAAGCGCATCAGCGGCCTCATCTACGAGGAGACTCGTGGTGTTTTGAAGATTTTC 364270 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| || | ||| || || |||||||||||||||| || |||||||| Sbjct 364269 CTAGAGAACGTGATTCGTGACGCCGTCACCTATACCGAGCACGCTCGTCGCAAGACTGTG 364210 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| | |||||| |||| || || |||| | || || || | | || ||||| ||| Sbjct 364209 ACCGCGATGGATGTCGTTTACGCGCTGAAGAGGCAGGGTCGAACTCTGTACGGTTTCGGA 364150 >seq5 Length=18898134 Score = 141 bits (156), Expect = 1e-29 Identities = 176/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| || ||||| ||||| || || || ||||||||||| | ||||| ||| Sbjct 764615 GATAACATCCAGGGCATCACGAAGCCGGCCATTCGCCGTCTGGCTCGCAGGGGTGGCGTC 764674 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | ||||||| |||| || | |||| |||||||||||||| || Sbjct 764675 AAGCGTATCAGCGGCCTTATCTATGAGGAGACACGCGGTGTTCTGAAGATCTTCCTCGAG 764734 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| || || | || || ||||||||| ||| || ||||| || || Sbjct 764735 AACGTCATCCGCGACGCCGTTACTTACACTGAGCACGCTCGACGGAAAACTGTTACTGCC 764794 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || || || | || | || || |||| | || ||||| ||| ||||| Sbjct 764795 ATGGATGTTGTGTACGCTCTCAAGAGGCAGGGGCGTACATTGTACGGTTTCGGAGGTTAA 764854 Query 16700 T 16700 | Sbjct 764855 T 764855 Score = 136 bits (150), Expect = 6e-28 Identities = 193/269 (72%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| | | || |||| |||||||| || ||||||||||| |||| Sbjct 1173980 CGCAAAGCGCCACCGCA-AGGTGTTGAGAGACAACATCCAGGGCATCACCAAGCCCGCTA 1174038 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||||||||| |||||||| || ||||| || || | |||| || |||| Sbjct 1174039 TTCGGCGTCTGGCTCGCCGTGGTGGCGTGAAGCGCATCAGCGGGCTCATCTACGAGGAGA 1174098 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||||||||||| ||| ||| |||| || ||| | ||| |||| Sbjct 1174099 CGCGGGGCGTGCTTAAGATCTTCCTTGAGAACGTCATCCGCGACGCTGTTACCTACACCG 1174158 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| || | ||||| | || |||||| | || | || | Sbjct 1174159 AGCACGCCCGTCGGAAGACTGTGACGGCGATGGACGTTGTTTATGCACTCAAGAGGCAGG 1174218 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | |||| || ||||| ||||| Sbjct 1174219 GCCGAACTCTTTACGGCTTTGGTGGTTAA 1174247 >seq7 Length=11725536 Score = 138 bits (152), Expect = 2e-28 Identities = 193/271 (71%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | || || || |||||||| |||||||| ||||| || ||| Sbjct 10543382 GCAAAGCGTCACCGTAAGGTGCTCCGGGACAACATCCAGGGAATCACGAAGCCGGCGATC 10543323 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || |||||||| | | || ||||| ||| | || || || | || || |||| Sbjct 10543322 CGGCGTCTGGCGAGGAGAGGCGGAGTGAAGAGAATCAGCGGTCTGATATACGAGGAGACG 10543263 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | |||| ||||||| |||||| ||| || ||| |||||| | ||| |||||| Sbjct 10543262 AGGGGTGTTCTGAAGATATTCCTCGAGAATGTGATCAGAGATGCTGTGACCTACACCGAG 10543203 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || || || |||||| ||||||| |||||||||| ||||| | || ||| Sbjct 10543202 CACGCTCGGCGCAAAACCGTCACCGCCATGGACGTCGTCTATGCTTTGAAGAGGCAGGGC 10543143 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | ||||| ||||| ||| || || Sbjct 10543142 CGCACCTTATATGGATTTGGTGGTTGATTTT 10543112 >seq12 Length=6373461 Score = 136 bits (150), Expect = 6e-28 Identities = 180/249 (72%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| || ||||||||||| || || || ||| |||| |||||||| || || Sbjct 1618405 GATAACATCCAGGGTATCACCAAGCCGGCGATTCGGCGTTTGGCCCGTCGTGGCGGTGTT 1618464 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| || || || |||| || |||| ||| | |||||||||||| ||||| || Sbjct 1618465 AAGCGCATCAGCGGTTTAATCTACGAGGAGACTCGCGGTGTTTTGAAGATTTTCCTGGAG 1618524 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || || | ||| || || ||| || ||||| ||| || ||||| || ||| || Sbjct 1618525 AATGTCATTCGTGACGCCGTCACCTACACTGAGCATGCTCGGCGGAAGACGGTGACCGCC 1618584 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA- 16698 ||||| | || ||||| | || | || || || | |||||||||| ||| | || Sbjct 1618585 ATGGACGTGGTTTATGCCCTCAAGAGGCAGGGACGCACCCTTTATGGTTTCGGAGGCTAG 1618644 Query 16699 -ATCTTCTA 16706 || ||||| Sbjct 1618645 GATTTTCTA 1618653 >seq9 Length=12411895 Score = 131 bits (144), Expect = 3e-26 Identities = 176/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||| || || ||||||||||| || ||||| ||||| ||| | | ||| Sbjct 2757074 CTCCGCGATAACATTCAGGGGATCACCAAGCCCGCCATCCGCCGTCTAGCTAGGAGAGGT 2757133 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| | ||||| || ||||||| |||| || | ||| | ||||||||| Sbjct 2757134 GGCGTGAAGCGGATTTCTGGGCTGATCTATGAGGAGACGCGCGGGGTTCTCAAGATCTTC 2757193 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| |||||| | ||||||| | ||| |||||||| || | | |||||||| Sbjct 2757194 CTTGAGAACGTTATACGTGATGCTGTTACCTACACCGAGCATGCCAGGAGGAAGACTGTA 2757253 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| | || || || |||| | || || | | |||| || ||||| Sbjct 2757254 ACTGCTATGGATGTAGTTTACGCTCTGAAGAGGCAGGGAAGGACTCTTTACGGGTTTGGT 2757313 Query 16694 AGTTA 16698 |||| Sbjct 2757314 GGTTA 2757318 >seq8 Length=21523998 Score = 127 bits (140), Expect = 3e-25 Identities = 178/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| || ||||||||||| | | | ||| |||| |||||||| || || Sbjct 10618043 GATAACATCCAGGGTATCACCAAGCCGGAGAATGGGCGTTTGGCCCGTCGTGGCGGTGTT 10617984 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||||| ||| || || |||| |||||| ||| | |||||||||||| || || || Sbjct 10617983 AAGCGCGTCAGCGGTTTAATCTACAAAGAGACTCGCGGTGTTTTGAAGATTTTTCTGTAG 10617924 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || || | ||| || || ||| |||||||| ||| || ||||| || ||| || Sbjct 10617923 AATGTCATTCGTGACGCCGTCACCTACACCGAGCATGCTCGCCGGAAGACGGTGACCGCC 10617864 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT-- 16697 ||||| | || ||||| | || | || || || | |||||||||| ||| | | Sbjct 10617863 ATGGACGTGGTTTATGCCCTCAAGTGGCAGGGACGCACCCTTTATGGTTTCGGAGGCTAG 10617804 Query 16698 AATCTTCTA 16706 ||| ||||| Sbjct 10617803 AATTTTCTA 10617795 >seq11 Length=15446199 Score = 122 bits (134), Expect = 1e-23 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| || ||||| ||||| ||||| || || ||||| || || || |||| Sbjct 14787929 GAGACAACATCCAGGGTATCACAAAGCCCGCTATTCGCCGGCTGGCGCGCCGAGGCGGAG 14787870 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| | || | |||| || || | ||||| ||| | ||||||||||| Sbjct 14787869 TGAAGCGTATAAGCGGGCTCATCTACGAGGAAACTCGTGGTGTCCTCAAGATCTTCCTTG 14787810 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||||| | |||||| | ||| |||||||||||| || |||||||| || Sbjct 14787809 AGAATGTTATTCGCGATGCTGTTACCTACACCGAGCACGCTCGCCGCAAGACTGTTACAG 14787750 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | ||||| | |||||||| | || | || || || | | || || ||||| ||| Sbjct 14787749 CGATGGACGTTGTCTATGCCCTTAAGAGGCAGGGACGAACTCTCTACGGATTTGGCGGTT 14787690 Query 16698 AA 16699 || Sbjct 14787689 AA 14787688 >seq4 Length=17356267 Score = 96.9 bits (106), Expect = 5e-16 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || || || ||||| || ||||| |||||||| | | || Sbjct 12303279 CTCCGCGACAACATCCAGGGCATAACGAAGCCGGCGATCCGGCGTCTGGCGAGGAGAGGC 12303220 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||| ||| | || || || | || || |||| | | ||| | ||||| ||| Sbjct 12303219 GGAGTGAAGAGAATCAGCGGTCTGATATACGAGGAGACGAGGGGAGTTCTCAAGATATTC 12303160 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| ||| || || | ||| ||||||||||| | | ||||| ||| Sbjct 12303159 CTGGAGAACGTCATCAGAGACGCCGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTC 12303100 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||| ||||||| | |||||||| ||||| | || ||||| Sbjct 12303099 ACCGCCATGGACGTTGTCTATGCTTTGAAGAGGCAGGGCCG 12303059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79060355311548