Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq16236 533 2e-146 seq8 298 9e-76 seq6 167 4e-36 seq2 111 3e-19 >seq16236 Length=153324 Score = 533 bits (590), Expect = 2e-146 Identities = 720/997 (72%), Gaps = 7/997 (1%) Strand=Plus/Minus Query 211570 TTCTGCGACTGGGTAAC-ATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCT 211628 ||||| ||||| |||| | || | || ||| | | || |||| |||||||||||| | Sbjct 1393 TTCTGTAACTGGATAACCAGCACCGAA-AACCGTCTTTACATTGGATGGTTTGGTGTTTT 1335 Query 211629 TATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCAC 211687 |||||||| | ||| | | | ||||| | ||||| | || ||||| || || | Sbjct 1334 GATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCCC 1276 Query 211688 CTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACA 211747 |||| || ||||| || || || |||||||| || |||| || || | || || |||| Sbjct 1275 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACA 1216 Query 211748 ACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTA 211807 | || ||||| ||||| || |||| |||| || |||||||| ||||| || || | Sbjct 1215 ATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAA 1156 Query 211808 TCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAA 211867 | |||||||||||| | ||||||| ||| | ||||| ||||||||||| | | | Sbjct 1155 TTTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 1096 Query 211868 TCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATACC 211927 | | |||||| | | || | | |||||||| | ||||||||||| | || Sbjct 1095 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1036 Query 211928 GTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCG 211987 || | |||||||| |||||||| |||||| |||||||| ||||| |||| ||| || Sbjct 1035 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 976 Query 211988 CTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTA 212047 |||| ||| | | |||||| ||||||| || || || || ||||||||| |||| | Sbjct 975 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 916 Query 212048 TATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACC 212107 | || || || |||||||||||| | |||||||| || || || |||||||||||||||| Sbjct 915 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 856 Query 212108 CATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACG 212167 |||| || ||| ||| || || ||| | ||||| || | ||||| ||||||||| | Sbjct 855 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 796 Query 212168 GTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATG 212227 |||| | || || ||| | ||| | |||||||| | || || || | | Sbjct 795 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 736 Query 212228 GTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCG 212287 |||||| ||||| ||||| ||||| || ||||| ||||| || || ||||| || || | Sbjct 735 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 676 Query 212288 GTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTCG 212347 | || | |||||||| ||||| ||||||||| | |||||||||||||| | Sbjct 675 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAG 616 Query 212348 CATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCA 212407 | | |||||||| | || | ||||| || || | |||||| |||| ||||| |||| Sbjct 615 CTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCA 556 Query 212408 ACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTA 212467 ||||||| || ||||| ||||||||||| || |||||| ||| || || || Sbjct 555 ACCTAAACGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATA 496 Query 212468 CTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATG 212527 |||||| |||| | | ||| | || ||||||||||||||||||||||| ||| | |||| Sbjct 495 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 436 Query 212528 CACACAACTTCCCACTTGACTTAGCATCTGCTAACGA 212564 | || |||||||| || ||| ||| |||||| ||| Sbjct 435 CTCATAACTTCCCTCTAGACCTAG---CTGCTATCGA 402 >seq8 Length=21523998 Score = 298 bits (330), Expect = 9e-76 Identities = 435/612 (71%), Gaps = 11/612 (2%) Strand=Plus/Plus Query 211953 TGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGG 212012 |||||| |||||||| | ||| |||| ||| | || | ||| | | |||||| ||| Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGCTACCACTATTTTCTTGATCTACCCAATCGA 7119405 Query 212013 TCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTT 212072 ||| || || || || ||||||||| |||| || || || || |||||||||||| | Sbjct 7119406 TCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGAT 7119465 Query 212073 CGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGG 212132 |||||||| || || || |||| ||||||||||||||| || ||| |||||| || || Sbjct 7119466 TGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 7119525 Query 212133 TATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTAT 212192 | | ||||| || | ||||| ||||||||| ||||| | || || ||| | || Sbjct 7119526 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 7119585 Query 212193 CCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGA 212252 | | |||||||| | || || || | ||| ||| |||| | |||||| Sbjct 7119586 CAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTCAAGAA----- 7119640 Query 212253 GACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATC 212312 || ||||| ||| | || || ||||| || || || || | |||||||| ||| | Sbjct 7119641 -ACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA-TATACTAG 7119698 Query 212313 ATTCAACAACAGCAGAAGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATG 212372 ||||||| | | | |||||||||||||| || | |||||| | | || | || Sbjct 7119699 TTTCAACAGC-TCCCATCATTACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATCTG 7119757 Query 212373 GTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCA 212432 || || || | |||||| |||| ||||| ||||||||||| || ||||| |||||||| Sbjct 7119758 CTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCA 7119817 Query 212433 ATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGC 212492 ||| || |||||| ||| || || ||| |||| |||| | | ||| | || Sbjct 7119818 ATCTGTAGTTGATAGCCAAGGCTGTGTAATTAATACCTGGGTTGATATGATCAACCGTGC 7119877 Query 212493 AAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||||||||||||||||| ||| | ||||| || |||||||| || ||| ||| Sbjct 7119878 TAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGACCTAG- 7119936 Query 212553 ATCTGCTAACGA 212564 |||||| ||| Sbjct 7119937 --CTGCTATCGA 7119946 >seq6 Length=25289714 Score = 167 bits (184), Expect = 4e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 211897 TACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTT 211956 |||||||| | ||||||||||| | |||| | |||||||| | |||||| |||| Sbjct 6246910 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACATTGGATTGCTGTT 6246969 Query 211957 GCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAG 212016 || ||| || | ||||| |||| ||| |||||| ||| | | |||||| ||||||| Sbjct 6246970 GCATATCCAACTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAA 6247029 Query 212017 GGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTA 212076 || || || || ||||||||| |||| || || || || |||||||||||| | ||| Sbjct 6247030 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTA 6247089 Query 212077 TTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATG 212118 ||||| || || || |||||||||||||||||||| || ||| Sbjct 6247090 TTCCAGGCTGAGCAGAACATCCTTATGCACCCATTTCACATG 6247131 >seq2 Length=18500646 Score = 111 bits (122), Expect = 3e-19 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286 |||||||| ||||| ||||| ||||| || ||||| ||||| || || ||||| || || Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAG-CAGAAGTTTACACTTCTTCCT 212345 || || | |||||||| ||||| ||||||||| || ||| |||||||||||| Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTCATCTGTT-ACACTTCTTCCT 3034028 Query 212346 CGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATT 212405 | | |||||||| | | | |||| || || | |||||| || ||||| || Sbjct 3034027 AGTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTTAGGTATCAGCGATATGGCTTT 3033968 Query 212406 CAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGAT 212445 ||| |||| | ||||| ||| ||||| | || |||||| Sbjct 3033967 CAATTTAAACGATTTCAATTTCGACCAACCTGTAGTTGAT 3033928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807391306672160