Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq11 122 8e-23 seq5 87.8 2e-12 seq1 86.0 6e-12 seq14 84.2 2e-11 >seq11 Length=15446199 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 ||||| | ||||||||||| | || || ||| | |||||| |||| | || | | | Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | ||||| || ||| ||||| ||||||||||| |||||||| Sbjct 13441914 -GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCA 13441972 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||| | || | || ||| |||||||| || |||| ||||| | |||||| || Sbjct 13441973 GCAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAA 13442032 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 |||||||| ||||| ||| | ||| |||| ||| |||| Sbjct 13442033 TATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACT 13442071 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26756 TTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGA 26815 |||| | || || |||||| | ||||| ||||| ||||||| ||| | || || |||| Sbjct 13444913 TTAGCCGAAGAAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGA 13444972 Query 26816 ATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGAT 26875 | | ||| | ||||||||||| | || || ||||| ||||| ||||| || Sbjct 13444973 AGTCGAAACCTCAGACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAAT 13445032 Query 26876 ACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGT 26935 || || ||||| || | || |||| || || ||||| | || |||| |||| | | Sbjct 13445033 TCCACCGGATCAGCAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCT 13445092 Query 26936 CAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||| || || ||||| || ||||| || |||| || ||||| |||| Sbjct 13445093 AGCCGATTACAATATTCAGAAGGAATCCACACTCCACCTCGTCCTCCGACT 13445143 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||||||||| | || || || | || ||| | ||| | || Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| ||| ||||||||||| || || || |||||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || ||||| || | ||||||| || | | ||| ||||| Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||| || || || ||| | ||| |||||||||| || Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGTCCTGAGGCT 13442299 >seq5 Length=18898134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TCA 26825 |||||| | ||||| || || | ||||| ||| | || ||| | ||| | ||| ||| Sbjct 2599331 ATGCAAATATTTGTGAAGACTCTTACTGGTAAAACTATTACCCTGGAAGTTGAAAGCTCA 2599272 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| || || | |||||| ||| ||| ||||| || ||||| ||||| || Sbjct 2599271 ---GACACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGAC 2599215 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || ||| | || | | ||||||||||| || |||| || | | | || || Sbjct 2599214 CAGCAGAGATTGATCTTTGCTGGCAAACAACTTGAGGATGGAAGGACCTTGGCAGATTAC 2599155 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || ||||| || ||||||| || ||| || | || || || Sbjct 2599154 AATATTCAGAAGGAATCGACCCTCCATCTTGTGCTGCGATTGAGGGGTGG 2599105 >seq1 Length=18577331 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||||||||| |||||||| || || || || ||||||| | || ||||| | ||| Sbjct 937478 GACAAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTGGAA 937537 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| |||| | | || || || |||||||||||||| || | || || || || Sbjct 937538 GATGGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAACACTTCACCTTGTTTTG 937597 Query 26982 AGACTTAGAGGAGGAAAAAT 27001 ||||| || ||||| | ||| Sbjct 937598 AGACTCAGGGGAGGGACAAT 937617 >seq14 Length=4882680 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 1411587 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCGGACCAG 1411528 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || ||||| || ||||| |||| | | | || |||||| ||| Sbjct 1411527 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTACAAC 1411468 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || || ||||| |||| |||||||| |||| | || |||| Sbjct 1411467 ATTCAGAAGGAGTCTACCCTCCACTTGGTCCTGCGACTCCGTGGTGGAA 1411419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478565255465920