Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq11 120 3e-22 seq5 116 3e-21 seq1 89.7 4e-13 seq6 84.2 2e-11 >seq11 Length=15446199 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 23978 TTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGA 24037 |||||| || || |||||| | ||||| ||||| ||||||| ||| | ||||| |||| Sbjct 13444913 TTAGCCGAAGAAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGA 13444972 Query 24038 AGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCAT 24097 |||||| || ||||||||||| | || || ||||| ||||| ||||| || Sbjct 13444973 AGTCGAAACCTCAGACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAAT 13445032 Query 24098 ACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGT 24157 || || ||||| ||| | ||||||| || || || || | || |||| ||||| | | Sbjct 13445033 TCCACCGGATCAGCAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCT 13445092 Query 24158 CAGCGATTATAACATTCAAAAAGAATCTACA 24188 |||||| || ||||| || ||||| ||| Sbjct 13445093 AGCCGATTACAATATTCAGAAGGAATCCACA 13445123 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| ||||| || || | |||||| ||||||||||| | Sbjct 13441167 AAGATGCAGATCTTTGTGAAAACCTTAACCGGCAAGACCATTACCCTCGAAGTCGAGAGC 13441226 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||| |||||||| | ||||| ||||| || || ||||| || ||||| ||| Sbjct 13441227 TCCGATACCATCGATAACGTCAAGGCGAAGATCCAGGATAAGGAAGGAATTCCTCCGGAT 13441286 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | || || | || ||| ||||| ||||| || | ||||| | | |||||| Sbjct 13441287 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCCGATTAC 13441346 Query 24168 AACATTCAAAAAGAATCTACAATTCA 24193 ||||| || || ||||| || |||| Sbjct 13441347 AACATCCAGAAGGAATCCACGCTTCA 13441372 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || || ||| | || ||| |||| || ||| | Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| || ||| ||||| ||||| ||||| |||||||| Sbjct 13441914 GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCAG 13441973 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | || ||| || ||||| || |||| |||| | ||| || || Sbjct 13441974 CAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAAT 13442033 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||||| ||||| || ||||||| ||| Sbjct 13442034 ATTCAAAAGGAATCGACTCTTCATTTGGTG 13442063 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || || || | |||||| | ||||| ||| | Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| ||| ||| ||||||||||| || || || |||||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||||| || |||||||| | ||||||| || | | ||||||||| Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| || || || || | ||||| || Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGT 13442290 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| | || || || ||||||| | ||||| ||| | Sbjct 11225288 AATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACGATTACTCTGGAAGTTGAGAGCTC 11225347 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| || | || || ||| || ||||| ||||| || ||||| || || Sbjct 11225348 AGATACCATTGACAATGTTAAGGCAAAAATCCAGGACAAGGAAGGGATTCCTCCTGACCA 11225407 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| |||||| | ||||||||||| ||||||| | ||| | | ||||| || Sbjct 11225408 GCAGAGATTGATTTTTGCTGGCAAGCAACTTGAAGATGGCCGAACCCTTGCTGATTACAA 11225467 Query 24170 CATTCAAAAAGAATCTACA 24188 || ||||| || |||||| Sbjct 11225468 TATCCAAAAGGAGTCTACA 11225486 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||||| || |||||| | || ||| | ||||| ||| Sbjct 13442310 ATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAAGTGGAGAGTTCG 13442369 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| || || |||||||| || || || || Sbjct 13442370 GACACCATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAGACCAG 13442429 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | | || ||||| || || |||| |||| || ||||||||| Sbjct 13442430 CAGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTATAAC 13442489 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || || || ||||| Sbjct 13442490 ATTCAGAAGGAGTCGACTCTTCAT 13442513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA--GGCC 24047 |||||| | |||||||| || | ||||| || ||||||| | ||||| || | | Sbjct 11225516 AATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACGATTACTCTGGAAGTTGAAAGTTC 11225575 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | || || || || | || || ||| || ||||||||||| || ||||| || Sbjct 11225576 A--GATACAATTGACAATGTTAAGGCAAAAATCCAGGACAAAGAAGGAATCCCTCCTGAC 11225633 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTA 24166 || |||||| |||| | | ||| || ||||| ||||||| || ||| || ||||| Sbjct 11225634 CAGCAGAGATTGATCTTTGCCGGTAAACAACTTGAAGATGGAAG-GACGCTGGCAGATTA 11225692 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || |||||||| || ||||| | ||| | | ||||| || ||| Sbjct 11225693 CAATATCCAGAAAGAATCAACCCTTCATCTTGTGCTGCGGTTGAGGGGTGGA 11225744 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| || |||||||| | || || | || || ||| Sbjct 11225744 AATGCAAATATTTGTCAAAACTTTGACTGGAAAGACCATCACTTTAGAGGTTGAGAGTTC 11225803 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || || |||||| || |||||||| || ||||| || || Sbjct 11225804 GGATACAATTGACAATGTTAAGGCGAAGATTCAGGATAAAGAAGGTATTCCTCCGGACCA 11225863 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | | || ||||| || ||||||| ||||| | |||||||| Sbjct 11225864 GCAGCGCTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGAACTCTTGCTGATTATAA 11225923 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| || || || ||||| | || || | |||| ||||| Sbjct 11225924 CATCCAAAAGGAGTCAACTCTTCATCTTGTCTTGCGGCTGAGGGGAGG 11225971 >seq5 Length=18898134 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| || ||||| || | ||||| | || || ||| Sbjct 2599103 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCA 2599044 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| |||||| || || |||||||| ||||| || ||| Sbjct 2599043 GACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAA 2598984 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || ||||| || ||||||| ||| | | |||||||| Sbjct 2598983 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAAT 2598924 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| ||||| ||||| |||| || |||||||||| || Sbjct 2598923 ATTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGG 2598877 >seq1 Length=18577331 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||||||||| |||||||| || || ||||| || |||| | || || || | ||| Sbjct 937478 GACAAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTGGAA 937537 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| ||||| | | ||||| || |||||||||||||| ||| |||| | || || Sbjct 937538 GATGGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAACACTTCACCTTGTTTTG 937597 Query 24204 AGATTGAGAGGAGG 24217 ||| | || ||||| Sbjct 937598 AGACTCAGGGGAGG 937611 >seq6 Length=25289714 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 |||||||||||||||||||| || || ||||| || || | | || || || | ||| Sbjct 18207846 GACAAAGAAGGCATACCTCCAGACCAGCAGAGGCTAATATTTGCTGGTAAACAGTTGGAA 18207787 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| ||||| | | ||||| || || ||||||||||| ||| |||| | || | Sbjct 18207786 GATGGCAGAACCCTGGCGGATTACAATATCCAAAAAGAATCCACACTTCACCTCGTCCTG 18207727 Query 24204 AGATTGAGAGGAGG-ACTATAAT 24225 ||| | || ||||| ||||| || Sbjct 18207726 AGACTCAGGGGAGGTACTATGAT 18207704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429850925876580