Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq11 116 3e-21 seq14 89.7 4e-13 >seq11 Length=15446199 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| || ||||| || || |||||| | ||| ||| | Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| |||| |||||| ||||||| || |||||||| | || ||||| Sbjct 13442142 GATACAATTG-ACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCA 13442200 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || |||| || ||||| || || ||||||| | || ||||||||||||| Sbjct 13442201 ACAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAA 13442260 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| ||| | ||| |||| |||| |||| || || Sbjct 13442261 TATTCAGAAGGAGTCGACTTTGCATTTGGTCCTGAGGCTGCGCGGTGG 13442308 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || | ||||| || ||||| || | || ||| | Sbjct 13254077 ATGCAGATTTTTGTTAAGACCTTGACGGGGAAGACCATAACATTGGAGGTTGAGAGCTCG 13254018 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || ||||| ||||| ||||| | ||| |||||| Sbjct 13254017 GACACTATTG-ACAATGTTAAGGCCAAAATCCAAGATAAGGAAGGGATTCCCCCTGATCA 13253959 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | | |||| ||| || || || | || |||| || ||| | || || ||||| Sbjct 13253958 ACAGCGTTTGATTTTTGCTGGTAAGCAGCTCGAGGATGGCAGGACCCTCGCTGACTATAA 13253899 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||| || | || ||||||||||| || ||||||| Sbjct 13253898 TATTCAAAAGGAGTCGACACTGCACCTGGTGTTGAGACTGAGAGGAGG 13253851 >seq14 Length=4882680 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || |||||||| || ||||| || || ||||| ||| | ||| ||| | | Sbjct 1410963 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTTGAGAGCTCC 1410904 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | |||| || || || ||| ||||| || || |||| || || Sbjct 1410903 GATACCATCG-ACAATGTGAAGGCCAAGATTCAAGATAAGGAGGGGATCCCACCAGACCA 1410845 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || ||||||| ||| || || || || || |||| | ||| |||| ||||| || Sbjct 1410844 GCAGAGGCTTATTTTTGCTGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCGGATTACAA 1410785 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 |||||| ||||||||||| | || |||| |||| Sbjct 1410784 CATTCAGAAAGAGTCTACCCTGCACTTGGTTCTGAG 1410749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425259834524320