Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq11 107 2e-18 seq14 105 5e-18 seq8 89.7 4e-13 >seq11 Length=15446199 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| ||||| || | || || | || |||||||||||||| || |||||||| ||||| Sbjct 13441853 CCCGCCTCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGC 13441794 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || |||| || |||| || | || || || || | || || ||||| || ||| || Sbjct 13441793 CAAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGG 13441734 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || || || ||| || | | | | ||||| | |||| Sbjct 13441733 AATTCCCTCCTTGTCTTGGATCTTAGC--CTTGACGTTGTCTATGGTGTCTGAGCTCTCC 13441676 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| |||||||||||||| ||||| || || |||||||| Sbjct 13441675 ACCTCCAGCGTGATCGTTTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 13441626 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||||||| |||| ||||| || |||||||| || || || || |||||| Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || ||||| || ||||| || |||| |||| |||||| || || Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || |||||||| ||||| ||||| || | | | | || || | ||| Sbjct 13442188 ATTCCTTCTTTGTCCTGAATTTT-TGCTTTTACATTGTCAATTGTATCAGAGCTCTCAAC 13442130 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||| || || || || ||||| ||||| |||||||||||||| Sbjct 13442129 TTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | ||| |||| ||| || || || |||||||| || ||||||||||| Sbjct 13442081 CCCACCGCGGAGTCGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGC 13442022 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||||| |||||| || || | || | || || || || || Sbjct 13442021 TAGAGTTCTACCATCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGG 13441962 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| ||||| ||| || | | | | ||||| | |||| Sbjct 13441961 TATCCCTTCCTTGTCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCAC 13441902 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 13441901 CTCGAGGGTGATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || || | || || |||||||||||||| ||||||||||| || Sbjct 13253167 CCACCTCGGAGTCGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCTGCA 13253226 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | || ||||| ||| | || |||| |||||||| || Sbjct 13253227 AGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGTTGGTCTGGTGGG 13253286 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | |||||| | | | ||| || |||| Sbjct 13253287 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTATCAATAGTATCTGAACTCTCCACC 13253346 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||| ||||| || |||| || |||||||| ||||||||| Sbjct 13253347 TCCAAGGTGATTGTTTTCCCTGTCAAAGTCTTGACAAAGATCTGCATT 13253394 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||||| || |||| |||| || || || ||||||||||| || || ||||| || Sbjct 13253622 CCCTCCTCTCAGTCTCAACACCAGGTGGAGAGTCGACTCCTTTTGAATATTATAGTCAGC 13253681 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| || ||||||| | || || || ||| | || | ||||| |||||| ||| Sbjct 13253682 AAGGGTCCTGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGAGG 13253741 Query 16828 CACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||| || ||||| || ||||| |||||| | | | | || || ||| Sbjct 13253742 AATGCCTTCCTTGTCTTGAATCTTTGC--CTTCACATTGTCTATTGTATCCGAACTCTCA 13253799 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || |||| || |||||||| |||||||| Sbjct 13253800 ACCTCCAAAGTGATTGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253849 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||||| || |||| |||| ||||| || ||||||||||| || || ||||| || Sbjct 13253850 CCCTCCTCTCAGTCTCAACACCAGGTGCAGTGTCGACTCCTTTTGAATATTATAGTCAGC 13253909 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| || | ||||| | || || || ||| |||| | |||||||| || || Sbjct 13253910 GAGGGTCCTGCCATCCTCGAGCTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGGGG 13253969 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || || || |||| ||| || | | | | |||||| | ||| Sbjct 13253970 AATCCCTTCCTTATCTTGGATTTTGGCCTTAACATTGTCAATAGTGTCCGAGCTCTCAAC 13254029 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || || |||| || || |||||||||||||| Sbjct 13254030 CTCCAATGTTATGGTCTTCCCCGTCAAGGTCTTAACAAAAATCTGCAT 13254077 >seq14 Length=4882680 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || ||||||||||| || ||||||||||| || Sbjct 1410965 CCACCACGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1411024 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | |||||| || || | ||||||| ||| ||||| || Sbjct 1411025 AGTGTTCGCCCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGG 1411084 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 1411085 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCAGAGCTCTCGA 1411142 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||||||| || || || || || ||||| ||||||||||| Sbjct 1411143 CTTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1411191 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| ||||||||||| |||| ||| | | |||||||| ||| Sbjct 1410533 TGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCCAGGGTCCTTCCATCCTCCAACTGT 1410592 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || | || ||| |||||| || | ||||| ||||| || ||| Sbjct 1410593 TTTCCAGCGAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTT 1410652 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || || | ||| ||| | ||||||||| || || | Sbjct 1410653 GC--CTTGACGTTGTCAATGGTATCCGAGCTCTCAACTTCAAGGGTGATGGTCTTCCCTG 1410710 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || ||||||||||| Sbjct 1410711 TAAGGGTCTTCACGAAAATCTGCAT 1410735 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| |||| || || || |||||||| || |||||||||||||| Sbjct 1411193 CCTCCACGGAGACGCAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 1411252 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | |||||||| || | || | || ||| |||||| || Sbjct 1411253 AGGGTGCGACCGTCCTCGAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGG 1411312 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | | |||||| | ||| Sbjct 1411313 ATTCCTTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCGGAGCTTTCCA 1411370 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || || || || || || || ||||| |||||| Sbjct 1411371 CCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAAATTTGCATT 1411420 >seq8 Length=21523998 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | || || ||| || || |||||||||||||||| | Sbjct 16226429 CCGCCGCGTAGGCGGAGGACGAGGTGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGAC 16226370 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| |||| || ||||| || | || || || ||||||||| ||| Sbjct 16226369 AAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGGA 16226310 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 || || ||||| || ||||| |||||| | | |||||||| |||| Sbjct 16226309 ACCCCTTCTTTTTCTTGAATTTTGGACTTCACATTTTCTACAGTGTCCGTACTCTCCACA 16226250 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||||||||||| || || || || |||||||| Sbjct 16226249 TCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACGAAGATCTGCAT 16226203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405007842705640