Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq15 219 5e-52 seq13 199 4e-46 seq5 91.5 2e-13 seq8 87.8 2e-12 seq6 87.8 2e-12 seq4 87.8 2e-12 seq3 87.8 2e-12 seq10 86.0 7e-12 seq7 86.0 7e-12 seq1 86.0 7e-12 seq12 82.4 8e-11 seq9 82.4 8e-11 >seq15 Length=10047770 Score = 219 bits (242), Expect = 5e-52 Identities = 582/876 (66%), Gaps = 15/876 (2%) Strand=Plus/Plus Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||| || || ||||| ||| |||| ||||||||||| ||||| |||| |||| ||| | Sbjct 1769014 TTTCTGATACTCCCCCACTCTTTTCTCAAAGAAATTAGTCTTCCCTTGCAAACTTATTAA 1769073 Query 92862 ATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 | || | | | || || | | | | ||| |||| || ||| | | || Sbjct 1769074 CTCCATCCAATCAAACGGGTTTTGGACATAATACAACTTCCCATACCCCAATGCATTCAG 1769133 Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAG 92979 ||||||||||| ||||| | ||||||||| |||||| || | |||||| || | | Sbjct 1769134 CAATCTATCAGCCACAAACTTAATGTACTGACTCATCAATTCTCCATTCATCCCCACCA- 1769192 Query 92980 ACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038 ||| || || || || ||| || || || | || || | || || || || | Sbjct 1769193 ACGCGCAAGGCAGCGCATCGCACACAAACTCCCTTTCAATGTCCACCGCGTCCGCCACTA 1769252 Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTT--TGTACGACATAATTGTACATTAAGCACGC 93096 | | | ||| | || | | | || | | | ||| || | || | |||||||| Sbjct 1769253 TCGCCTTCACTTT-CTCCTCGCTCAACTTCATTTTCAACA-AACTATAAAGCAAGCACGC 1769310 Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156 ||| ||| || ||||| || || ||||| || || || ||| ||| |||||||| || Sbjct 1769311 AAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTTAAACCCGG 1769370 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216 | || || || ||||| ||||||||||||| | || || || || |||||||| || Sbjct 1769371 CATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAAAATATGCC 1769430 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCA 93276 |||||| |||||| | | | |||||||||||| || | || | |||||| Sbjct 1769431 TTCCACACAAGCAAATCCGATTAATCGTTCGGCAAAAGTTTCAGA---GCCATCGATCCA 1769487 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 ||||||||| | || || |||| | ||| || | || ||||| ||| ||| || Sbjct 1769488 GCGTAAAGCCCATTTAGCCTTCTTCTCCACACATGGGACAGTCTCGATTGCGCGAAAAAG 1769547 Query 93337 -GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 | ||| |||| ||||||| ||| || | || | || ||| |||||| || | Sbjct 1769548 CATGTTCT-TCTCGGCCGAATCCTTTATATAGGATTCAAGCAAAAGACTATACATCTCGG 1769606 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455 |||||| ||||| || ||||| || || || ||||| | ||| || | || ||| | Sbjct 1769607 AATGGATGTTCTCAATGGCAATCTGAAACCCATAGAAGGCACGAGCCTCGGAGACCTGAA 1769666 Query 93456 CTT-CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 ||| ||| | || || | | || || || || || ||||| || || || || Sbjct 1769667 CTTCCTTCATGAAGCGTC-CAGCAAGGTTCTCCAAAACAATGCCATCAGAGGCGGCGAAG 1769725 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT 93574 || || | | || || || ||||| ||||| ||| | || || ||||| | | Sbjct 1769726 AAGGCGAGAACGTGTTTGATGAAATGCTTCTCGTCAGAAGTGAGGTTTTCCCAGTGGCGG 1769785 Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTAC 93634 || |||| || | ||| ||||| || ||||||| || || ||||| ||||| |||||| Sbjct 1769786 AGGTCTTGGGACAAATCCACTTCCTCCGCAGTCCAGAAGGACGCTTCGGCTTTCTTGTAC 1769845 Query 93635 ATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 || ||||| || | | | || || || || || ||| Sbjct 1769846 ATTTCCCAGATTTGTGGGTACTGGATGGGGAACATG 1769881 >seq13 Length=5050363 Score = 199 bits (220), Expect = 4e-46 Identities = 576/876 (66%), Gaps = 19/876 (2%) Strand=Plus/Minus Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || || ||||||||||| | || |||||||| ||||| || |||| |||| ||| | Sbjct 3176510 TTCTGATATTCCCCAACCCTCTTCTCAAAGAAGTTTGTTTTCCCTTGCAAACTAATCAAT 3176451 Query 92863 TTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAAT 92920 | || | | | |||||||| | | || ||||| || | ||| | | ||| Sbjct 3176450 TCCATCCAATCAAATGGATTCTGCACATGGTACAACTTTCCATAGCCCAAAGCATTCAAC 3176391 Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 | ||||||||| |||||||| |||||||| ||||||||| | |||||| || | || Sbjct 3176390 AGTCTATCAGCCACAAATTCAATGTACTGGCTCATCAAATCTCCATTCATCCCCACCAGC 3176331 Query 92981 -CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 || | ||| || || || || || || |||| || || || || || || Sbjct 3176330 GCGCA-AGGCAGCGCATCACACACAAACTCCCTCTCTATATTCACTGCGTCCGCCACTAT 3176272 Query 93040 TTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGCA 93097 | || | ||| | || | | | || | | | ||| || |||| | | ||||||| Sbjct 3176271 TCCTTTCACTTT-CTCCTCACTCAGCTTCATTTTCAACA-AACTGTAAAGCAGGCACGCA 3176214 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157 || || ||| |||||||| ||||| || || || |||||| ||| || || || || Sbjct 3176213 AAATCACAATGCAAACCTTCATCTCGCGAAATTAATTCATTGGAGAAAGTCAAGCCCGGC 3176154 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA-CTACCAGaaaaaaaTATACC 93216 | || || || || || | ||||||||| | ||| || || || || |||||||| || Sbjct 3176153 ATCATCCCGCGCTTTTTCAACCAAAATATGGC-GCAGAAGCTCCCCGAGAAAAATATCCC 3176095 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA---ATTACTGCTGAT 93273 || || ||||| || || | || || ||||| | | || || | || Sbjct 3176094 CTCAACACAAGCAAAGGCGACTAACCGCTCAGCAAAGGATTCAGAGCCATCA------AT 3176041 Query 93274 CCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAA 93333 ||| | ||||| | ||| || || | | ||||| | || || || ||| || Sbjct 3176040 CCAGCGCATGGCCCACTTGGCCTTCTTTTCCACGCAAGGAACGGTCTCAATTGCGCGGAA 3175981 Query 93334 TAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTC 93393 |||| | | |||| |||| ||| ||||| | || | | ||| ||||| || Sbjct 3175980 GAGGTGGTTTTTCTCGGCCGAGTCTTTGATGTAAGACTCAAGCAGAAGACTGTACATCTC 3175921 Query 93394 AGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTG 93453 ||||| | ||||| || ||||||||||| |||||||| | || || | |||||| Sbjct 3175920 GGAATGAATGTTCTCAATGGCAATTTGGAAGCCGTAGAAGGCACGGGCCTCGGAGATCTG 3175861 Query 93454 CACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513 || |||| || | | |||||||||| || ||||||||||| || ||||| Sbjct 3175860 GACCTCTTTCATGAAGCGTCCAGCGAGATTTTCCAAAACGATACCATCGGAGGCAGCAAA 3175801 Query 93514 aaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 || || | | || || | ||||| ||||| || | || ||||||| | Sbjct 3175800 GAAGGCGAGGACGTGTTTGACGAAATGCTTCTCGTCGGAGGTGAGGGCTTCCCAATGGCG 3175741 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 || || | || | ||| ||||| ||| | ||||| || || ||||||||||||||||| Sbjct 3175740 GAGGTCCTGAGATAAATCAACTTCCTCGGCGGTCCAGAAGGAAGCTTCTGCTTTTTTGTA 3175681 Query 93634 CATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 ||| ||||| | | | | || ||||| || || || Sbjct 3175680 CATCTCCCAGACCTGTGGGTAGTGAATGGGGAACAT 3175645 >seq5 Length=18898134 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 2758747 CAGCTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 2758804 Query 126328 TTCGAACCCCACACCTGACAAA-TTATTATTGGAATTTTT 126366 ||| || |||||| ||| |||| ||||||| ||||||| Sbjct 2758805 TTCAAATCCCACAGCTGTCAAATTTATTAT--AAATTTTT 2758842 >seq8 Length=21523998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 20791991 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 20791934 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||| || ||||| |||||||| Sbjct 20791933 CGTGGGTTCAAATCCCACTTCTGACAAA 20791906 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 18415582 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 18415639 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 18415640 CGTGGGTTCAAATCCCACTTCTGACA 18415665 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCG 126323 ||| ||| |||||||||||||||||||||||||||||| | |||||| || | ||| Sbjct 575857 CAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCG 575914 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || |||||| ||| || Sbjct 575915 TGGGTTCAAATCCCACAGCTGTCA 575938 >seq6 Length=25289714 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 6/90 (7%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 7865885 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 7865828 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||| || ||||| ||||||| || Sbjct 7865827 CGTGGGTTCAAATCCCACTTCTGACAATTT 7865798 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/95 (81%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 126257 CTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC 126316 |||| | ||||||| ||||||||||||||||||||||||| | ||| |||||| |||| Sbjct 17370602 CTATCAAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTC 17370545 Query 126317 GGGA----GCGTGGGTTCGAACCCCACACCTGACA 126347 | || |||||||||| || ||||| |||||| Sbjct 17370544 GTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACA 17370510 >seq4 Length=17356267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/95 (81%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 12671208 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 12671265 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTA 126355 |||||||||| || ||||| |||||| ||||| Sbjct 12671266 GCGTGGGTTCAAATCCCACTTCTGACAGCATATTA 12671300 >seq3 Length=24928530 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 23666813 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 23666756 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||| || ||||| ||||||| Sbjct 23666755 GCGTGGGTTCAAATCCCACTTCTGACAA 23666728 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 3950305 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 3950362 Query 126328 TTCGAACCCCACACCTGACAAA 126349 ||| || |||||| ||| |||| Sbjct 3950363 TTCAAATCCCACAGCTGTCAAA 3950384 >seq10 Length=17245970 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 6/89 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 7721729 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGGG 7721786 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||| || ||||| ||||||||| Sbjct 7721787 CGTGGGTTCAAATCCCACTTCTGACAAAT 7721815 >seq7 Length=11725536 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 3069401 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 3069344 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 3069343 GCGTGGGTTCAAATCCCACTTCTGACA 3069317 >seq1 Length=18577331 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 6/89 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1452476 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1452533 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||| || ||||| |||||| || Sbjct 1452534 CGTGGGTTCAAATCCCACTTCTGACATAT 1452562 >seq12 Length=6373461 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 4984298 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 4984241 Query 126328 TTCGAACCCCACACCTGACAAATT 126351 ||| || |||||| ||| || ||| Sbjct 4984240 TTCAAATCCCACAGCTGTCATATT 4984217 >seq9 Length=12411895 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCG 126323 ||| ||| |||||||||||||||||||||||||||||| | |||||| || | ||| Sbjct 5957023 CAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCG 5956966 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || |||||| ||| || Sbjct 5956965 TGGGTTCAAATCCCACAGCTGTCA 5956942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556747785100640