Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq5 129 4e-25 seq11 102 6e-17 >seq5 Length=18898134 Score = 129 bits (142), Expect = 4e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || || | || || ||||| |||||| ||||| ||| | || Sbjct 2599331 ATGCAAATATTTGTGAAGACTCTTACTGGTAAAACTATTACCCTGGAAGTTGAAAGCTCA 2599272 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || ||||||| || || ||||| | ||| | |||| Sbjct 2599271 GACACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 2599212 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | |||||||||||||||||||| || ||| || || |||| ||||||||| Sbjct 2599211 CAGAGATTGATCTTTGCTGGCAAACAACTTGAGGATGGAAGGACCTTGGCAGATTACAAT 2599152 Query 22014 ATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||||| || || ||| Sbjct 2599151 ATTCAGAAGGAATCGACCCTCCAT 2599128 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| || || || || |||||||| | || || || Sbjct 2599103 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCA 2599044 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| || ||| ||||| || || | ||| | ||||| Sbjct 2599043 GACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAA 2598984 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| || | ||||||||||| || || || |||||| | ||| | || ||||| ||| Sbjct 2598983 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAAT 2598924 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || || |||||||||||| | || || || || |||| || Sbjct 2598923 ATTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGG 2598877 >seq11 Length=15446199 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| | |||||||| || |||||| ||||| || | | Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || ||||||| || ||||| || | || | | ||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || || |||||||| || | |||||| || ||| |||||||||| ||| Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||||||||| || ||| | ||| |||| Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGT 13442290 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| | || || | || || || || ||||| ||||| ||| | Sbjct 11225516 AATGCAGATTTTTGTAAAGACTCTTACTGGTAAGACGATTACTCTGGAAGTTGAAAGTTC 11225575 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | | || ||||| |||||| || ||||| || | ||| |||| Sbjct 11225576 AGATACAATTGACAATGTTAAGGCAAAAATCCAGGACAAAGAAGGAATCCCTCCTGACCA 11225635 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| | |||||||| || |||||||| |||||| || || |||| |||||||| Sbjct 11225636 GCAGAGATTGATCTTTGCCGGTAAACAACTTGAAGATGGAAGGACGCTGGCAGATTACAA 11225695 Query 22013 TATTCAGAAGGAATCTACTCTTCAT 22037 ||| ||||| ||||| || |||||| Sbjct 11225696 TATCCAGAAAGAATCAACCCTTCAT 11225720 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| | ||||| | ||||| || || ||||| ||||| || | | Sbjct 11225288 AATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACGATTACTCTGGAAGTTGAGAGCTC 11225347 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | | || ||||| |||||| || || || || | ||| |||| Sbjct 11225348 AGATACCATTGACAATGTTAAGGCAAAAATCCAGGACAAGGAAGGGATTCCTCCTGACCA 11225407 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| | || ||||||||||| ||||| |||||| ||| | || |||||||| Sbjct 11225408 GCAGAGATTGATTTTTGCTGGCAAGCAACTTGAAGATGGCCGAACCCTTGCTGATTACAA 11225467 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 ||| || ||||| ||||| || || Sbjct 11225468 TATCCAAAAGGAGTCTACACTCCA 11225491 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || ||||| || || |||||||| ||| ||||| ||| | Sbjct 13442310 ATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAAGTGGAGAGTTCG 13442369 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| || ||||| || || | || | |||| Sbjct 13442370 GACACCATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAGACCAG 13442429 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||||||||| || || || || ||| | |||| | || ||||| || Sbjct 13442430 CAGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTATAAC 13442489 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATT 22065 ||||||||||| || ||||||||| | || | || | || || || |||| Sbjct 13442490 ATTCAGAAGGAGTCGACTCTTCATCTTGTTCTCCGCCTTCGTGGTGGTTATT 13442541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | ||||| || || || || ||||| || | || || | Sbjct 11225744 AATGCAAATATTTGTCAAAACTTTGACTGGAAAGACCATCACTTTAGAGGTTGAGAGTTC 11225803 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | || ||||| || ||| |||||||| ||| | ||| |||| Sbjct 11225804 GGATACAATTGACAATGTTAAGGCGAAGATTCAGGATAAAGAAGGTATTCCTCCGGACCA 11225863 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | | ||||||||||| || || || |||||| | |||| | || ||||| || Sbjct 11225864 GCAGCGCTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGAACTCTTGCTGATTATAA 11225923 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 || || ||||| || ||||||||| | || || || Sbjct 11225924 CATCCAAAAGGAGTCAACTCTTCATCTTGTCTTGCG 11225959 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| | || |||||||| || ||| | || ||| | || Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | | ||| |||||| || || || || |||| | || Sbjct 13441914 GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCAG 13441973 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || | ||||| || || |||||||| || ||| | |||| | ||||| |||||| Sbjct 13441974 CAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAAT 13442033 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||| |||||||| ||||||||| |||| Sbjct 13442034 ATTCAAAAGGAATCGACTCTTCATTTGGT 13442062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || |||||||| ||| | ||||| |||| |||||||| ||||| | ||| ||| || Sbjct 13444923 AAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGAAGTCGAAACC 13444982 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 |||| || | | | || ||||| || || || || || || | || | Sbjct 13444983 TCAGACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCACCGGAT 13445042 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||| | || || || ||||| ||||| | || ||| | ||| | ||||||||| Sbjct 13445043 CAGCAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCTAGCCGATTAC 13445102 Query 22011 AATATTCAGAAGGAATCTACTCTTCA 22036 ||||||||||||||||| || || || Sbjct 13445103 AATATTCAGAAGGAATCCACACTCCA 13445128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358053935607544