Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq15 125 1e-23 seq13 122 2e-22 >seq15 Length=10047770 Score = 125 bits (138), Expect = 1e-23 Identities = 367/560 (66%), Gaps = 13/560 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | ||| |||||| || ||||| | || || Sbjct 1769856 ATCTGGGAAATGTACAAGAAAGCCGAAGCGTCCTTCTGGACTGCGGAGGAAGTGGATTTG 1769797 Query 42360 GCCAAGGACA-CGGCCGGCTGGGAG----TCACTGTCTGAGAACGAAAAGTTTTTCCTCA 42414 || | ||| | ||| |||||| ||||| ||||| ||| ||| |||| ||| Sbjct 1769796 TCCCAAGACCTCCGCCA-CTGGGAAAACCTCACT-TCTGA---CGAGAAGCATTTCATCA 1769742 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 || || | || |||||||||||||||||||| ||||| || |||||||| || Sbjct 1769741 AACACGTTCTCGCCTTCTTCGCCGCCTCTGATGGCATTGTTTTGGAGAACCTTGCTGGAC 1769682 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||||||| || || ||| || ||||| || |||||| || || ||||| |||| Sbjct 1769681 GCTTCATGAAGGAAGTTCAGGTCTCCGAGGCTCGTGCCTTCTATGGGTTTCAGATTGCCA 1769622 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCG 42594 | |||||| | || || ||| |||| |||| | | || || |||| | | Sbjct 1769621 TTGAGAACATCCATTCCGAGATGTATAGTCTTTTGCTTGAATCCTATATAAAGGATTCGG 1769562 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 |||| ||| ||| || || || ||||| | || || | |||||||||| Sbjct 1769561 CCGAGAAGAACATGCTTTTTCGCGCAATCGAGACTGTCCCATGTGTGGAGAAGAAGGCTA 1769502 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 | ||||| | ||||||||| | | || ||| || | ||| | | | | | Sbjct 1769501 AATGGGCTTTACGCTGGATCGATGGCTCTGA---AACTTTTGCCGAACGATTAATCGGAT 1769445 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 || | || || ||||| || |||||||| |||| | || || ||||| ||| Sbjct 1769444 TTGCTTGTGTGGAAGGCATATTTTTCTCGGGAAGCTTCTGTGCAATATTTTGGCTGAAGA 1769385 Query 42775 AGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 || | | |||||| || | || ||||| |||||| | ||| |||| ||||| Sbjct 1769384 AGCGTGGTTTGATGCCGGGTTTAACTTTCTCCAACGAATTAATCTCACGGGATGAGGGTT 1769325 Query 42835 TGCATAGGGACTTTGCCTGC 42854 |||| | || ||||| ||| Sbjct 1769324 TGCACTGCGATTTTGCGTGC 1769305 >seq13 Length=5050363 Score = 122 bits (134), Expect = 2e-22 Identities = 367/561 (65%), Gaps = 7/561 (1%) Strand=Plus/Plus Query 42301 TCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 ||||| |||||||| || || | || | ||| ||||||||||||||| |||| | Sbjct 3175670 TCTGGGAGATGTACAAAAAAGCAGAAGCT-TCCTTCTGGACCGCCGAGGAAGTTGATTTA 3175728 Query 42360 GCCAAGGA-CACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAA 42418 | |||| | | ||| ||||| | || | |||| ||| |||| ||||| | Sbjct 3175729 TCTCAGGACCTCCGCC-ATTGGGAAGCCCTCACCTCCGACGAGAAGCATTTCGTCAAACA 3175787 Query 42419 CATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTT 42478 | | || |||||||| || ||||| || || || || || || || || | || Sbjct 3175788 CGTCCTCGCCTTCTTTGCTGCCTCCGATGGTATCGTTTTGGAAAATCTCGCTGGACGCTT 3175847 Query 42479 CATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGA 42538 |||||||||||| ||| || ||||| || ||||||||||||||| || ||||| || Sbjct 3175848 CATGAAAGAGGTCCAGATCTCCGAGGCCCGTGCCTTCTACGGCTTCCAAATTGCCATTGA 3175907 Query 42539 GAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGA 42598 |||| | || || ||| ||||| ||||| | | |||||| || | | ||| Sbjct 3175908 GAACATTCATTCCGAGATGTACAGTCTTCTGCTTGAGTCTTACATCAAAGACTCGGCCGA 3175967 Query 42599 GCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658 | ||| || ||| || || ||||| | || ||| | | |||||||| | || Sbjct 3175968 GAAAAACCACCTCTTCCGCGCAATTGAGACCGTTCCTTGCGTGGAAAAGAAGGCCAAGTG 3176027 Query 42659 GGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTAC 42718 ||| | |||||| || | | || | | || | ||| || | || |||||| | Sbjct 3176028 GGCCATGCGCTGGATTGATGGCTCTGA---ATCCTTTGCTGAGCGGTTAGTCGCCTTTGC 3176084 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 || ||||| || || |||||||| |||| | |||| || ||| | || || Sbjct 3176085 TTGTGTTGAGGGGATATTTTTCTCGGGGAGCTTCTGCGCCATATTTTGGTTGAAAAAGCG 3176144 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | | |||||| || | || ||||| || ||| | || | || || || |||| Sbjct 3176145 CGGGATGATGCCGGGCTTGACTTTCTCCAATGAATTAATTTCGCGAGATGAAGGTTTGCA 3176204 Query 42839 TAGGGACTTTGCCTGCCTCCT 42859 | | || ||||| ||||| || Sbjct 3176205 TTGTGATTTTGCGTGCCTGCT 3176225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944147546359360