Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 8e-16 >seq11 Length=15446199 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| ||| || || || || || |||||| ||||||||| ||||||||||| ||| Sbjct 13441624 CCACCTCGCAGACGTAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441565 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || |||| || | ||||| ||||| || || |||||||||||||| ||| Sbjct 13441564 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCTGGCGGA 13441505 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080 | | ||| ||||| || || ||||| | | | | || | | || Sbjct 13441504 ATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTTATCTATCGTGTCGGAACTCTCAACC 13441445 Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | ||| || |||||||| ||||| ||||||||||| || ||||| Sbjct 13441444 TCCAGCGTGATCGTTTTTCCCGTTAGGGTTTTCACAAAAATCTGCAT 13441398 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| ||| || || || || || |||||| ||||||||| ||||||||||| ||| Sbjct 13441852 CCGCCTCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441793 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || |||| || | ||||| ||||| || || ||||||||||||||| ||| Sbjct 13441792 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGA 13441733 Query 34021 ACGCTCTCTTTGTC 34034 | | ||| ||||| Sbjct 13441732 ATTCCCTCCTTGTC 13441719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396983830781272