Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 2e-15 >seq15 Length=10047770 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 242869 TCTGCAT--TCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAA 242926 ||||||| ||||||||||||| || | || ||||| ||||| ||||| || | || Sbjct 1769885 TCTGCATGTTCCCCATCCAGTACCCACAAATCTGGGAAATGTACAAGAAAGCCGAAGCGT 1769826 Query 242927 CCTTTTGGACCACCGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAAC 242986 |||| ||||| | |||||||| | || | |||| || | ||||| || || | Sbjct 1769825 CCTTCTGGACTGCGGAGGAAGTGGATTTGTCCCAAGACCTCCGCCACTGG---GAAAACC 1769769 Query 242987 TCAATGACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATG 243046 ||| | ||||| ||||||||||||||| |||| | || ||||| | ||| |||| Sbjct 1769768 TCACTTCTGACGAGAAGCATTTCATCAAACACGTTCTCGCCTTCTTCGCCGCCTCTGATG 1769709 Query 243047 GTATTGTGATGGAAAATCT 243065 | ||||| |||| || || Sbjct 1769708 GCATTGTTTTGGAGAACCT 1769690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102650574766600