Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 seq11 122 6e-23 seq14 102 6e-17 seq8 87.8 1e-12 >seq5 Length=18898134 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| ||||||| |||||| ||||| |||||||| || || ||||| Sbjct 2598877 CCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGCA 2598936 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | || | ||||| | || || ||||| | ||||| ||||||||||| ||| Sbjct 2598937 AGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGGTCTGGAGGA 2598996 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||| ||| || ||| | || || || || | | || || Sbjct 2598997 ATGCCTTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAACTCTCAACC 2599056 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| |||||||| || || |||| ||||| |||||||| ||||| Sbjct 2599057 TCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 ||||||| | ||||| | || | ||| ||||| || || || || || |||||||| | Sbjct 2599103 TGCCACCCCTCAATCGCAGCACAAGATGGAGGGTCGATTCCTTCTGAATATTGTAATCTG 2599162 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 | || | || | || || | |||||||||||| | ||||| | ||| ||||| Sbjct 2599163 CCAAGG-TCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGA 2599221 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 ||||| || |||||||| |||||| ||| ||| | || || || || |||| Sbjct 2599222 GGAATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATTGTCAATTGTGTCTGAGCTTTCA 2599281 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || | |||||| |||||||| || ||||| || ||||| |||||||| Sbjct 2599282 ACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGCAT 2599331 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || ||||| || ||||| ||||| || | | | ||||| | || Sbjct 2598673 TGAAGGGTTGATTCTTTCTGGATGTTATAATCTGCAAGGGTACGGCCATCTTCGAGCTGC 2598732 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | |||| ||||| || || ||| || ||||||||||| |||||| Sbjct 2598733 TTCCCTGCAAAGATCAGCCGCTGCTGATCCGGTGGTATCCCTTCCTTGTCCTGAATTTTT 2598792 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || ||||| |||| || || || || || || || |||||| Sbjct 2598793 GCCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAAGTGATTGTCTTCCCTGTC 2598852 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | ||| |||||||| |||||||| Sbjct 2598853 AAAGTCTTTACAAAGATTTGCAT 2598875 >seq11 Length=15446199 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| || | || ||||| | || || || || || || || |||||| Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | || | ||||| || || ||||||||| | |||| | |||||| || |||| Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| |||||| ||||||| | || || ||||| | || || Sbjct 13442188 ATTCCTTCTTTGTCCTGAATTTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCAACT 13442129 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | |||||| || || || ||||| |||||||||||||| ||||| Sbjct 13442128 TCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||| | | || | ||||||||| || ||||| || || |||||||| Sbjct 11225743 CCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCC 11225684 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | |||||| || || | ||||| | ||| ||||| || Sbjct 11225683 AGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGG 11225624 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| ||||| || ||| | || || ||||| | |||| || Sbjct 11225623 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACT 11225564 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| || ||||| || ||||| ||||||||||| ||||| Sbjct 11225563 TCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || | || |||||||| || || || ||||| || ||||| ||| Sbjct 13442080 CCACCGCGGAGTCGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCT 13442021 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | || || | |||||| || ||| | ||||| | || || ||| || Sbjct 13442020 AGAGTTCTACCATCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGT 13441961 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| || || | ||||| || || | || || Sbjct 13441960 ATCCCTTCCTTGTCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACC 13441901 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| || ||||| || ||||||||||||||||| || ||||| Sbjct 13441900 TCGAGGGTGATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || || ||||||||| || |||| | || || || ||| Sbjct 13445128 TGGAGTGTGGATTCCTTCTGAATATTGTAATCGGCTAGGGTTCTGCCATCCTCCAACTGT 13445069 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | |||| |||||| || || |||||||||||||||||| || ||| Sbjct 13445068 TTCCCAGCGAAAATCAGACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTTG 13445009 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || || |||| || || | ||||| ||||| || || Sbjct 13445008 GCCTTAACATTGTCGATGGTGTCTGAGGTTTCGACTTCGAGAGTAATTGTTTTGCCAGTT 13444949 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 || ||||| ||||| |||||||| || Sbjct 13444948 AGGGTTTTCACAAAGATTTGCATCTT 13444923 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || ||||| || ||||||||||| || | || | || || Sbjct 13254097 ACCAAATGCAGGGTCGATTCTTTCTGGATGTTGTAATCTGCAAGGGTCCTGCCATCCTCA 13254156 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || || || | ||||| | ||| ||||| ||||| ||||||||||| | Sbjct 13254157 AGTTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCTGGAGGAATCCCTTCCTTGTCCTGA 13254216 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| | || || |||||| |||| || || | ||| || || || Sbjct 13254217 ATTTTCGCCTTGACATTATCAATCGTATCGGAGCTTTCCACTTCCAGGGTTATAGTCTTC 13254276 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || || || ||||| || ||||| Sbjct 13254277 CCTGTGAGGGTCTTGACAAAGATCTGCAT 13254305 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || || || || |||||||| || | | ||||||| | || Sbjct 13254330 ATGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCAAGCGTGCGTCCGTCTTCAAGCTG 13254389 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| | ||||| | || || || ||||||||||| || || ||| || Sbjct 13254390 CTTTCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATCTT 13254449 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||||| | || ||||||||| | | || || || | || ||||| || || || Sbjct 13254450 AGCTTTTACATTATCAATAGTATCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCGGT 13254509 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| || |||||||| |||||||| Sbjct 13254510 CAGGGTCTTTACAAAGATTTGCAT 13254533 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || ||||| || ||||| || |||||||| || ||| | ||||| | ||| Sbjct 11225491 TGGAGTGTAGACTCCTTTTGGATATTGTAATCAGCAAGGGTTCGGCCATCTTCAAGTTGC 11225432 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 |||||||| | ||||| | ||| ||||| ||||| ||||||||||| ||||| Sbjct 11225431 TTGCCAGCAAAAATCAATCTCTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGGATTTTT 11225372 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || ||||| | || || || | ||||| || || || || Sbjct 11225371 GCCTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCCAGAGTAATCGTCTTCCCCGTA 11225312 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| |||||||| ||||| Sbjct 11225311 AGGGTTTTCACAAAAATCTGCAT 11225289 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| || || | || || || || || ||||| || || || || Sbjct 13253623 CCTCCTCTCAGTCTCAACACCAGGTGGAGAGTCGACTCCTTTTGAATATTATAGTCAGCA 13253682 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || |||| || | || || ||||| | ||||||||||| ||||| ||| Sbjct 13253683 AGGGTCCTGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGAGGA 13253742 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | ||||| ||||| | | || || Sbjct 13253743 ATGCCTTCCTTGTCTTGAATCTTTGC-CTTCACATTGTCTATTGTATCCGAACTCTCAAC 13253801 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || || |||| || || ||||| || ||||| Sbjct 13253802 CTCCAAAGTGATTGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253849 >seq14 Length=4882680 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || |||||||| || || || |||||||| ||| || | | |||| || Sbjct 1411211 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCG 1411270 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||||||| | ||||| | ||| ||||| || |||||||||||||| Sbjct 1411271 AGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGG 1411330 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | || || || ||| |||| || || | ||| ||||| || Sbjct 1411331 ATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTG 1411390 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || || || || ||||||||||| Sbjct 1411391 CCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || ||||||||||| || || || |||||||| ||| ||| | | ||||| Sbjct 1411664 AAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCT 1411723 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | || || || ||| | || || | ||| ||||| ||||||||||||||||| Sbjct 1411724 TCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCC 1411783 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || ||| || || | || || || || | |||| || || | ||| ||||| Sbjct 1411784 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCACCTCAAGGGTGATGGTC 1411843 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| |||||||| || || || ||||| Sbjct 1411844 TTGCCTGTAAGAGTTTTCACGAAGATCTGCAT 1411875 >seq8 Length=21523998 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 ||||| ||||||||||| ||| | | | | ||||||| | || ||||| ||| || Sbjct 16226393 TCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAAT 16226334 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 |||| || |||||||| |||| ||||| || || ||||||| || ||| || Sbjct 16226333 ATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTCACATTT 16226274 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 |||| ||| || || | || || || | || |||||||| || |||| || || || Sbjct 16226273 TCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACG 16226214 Query 15166 AAAATTTGCAT 15176 || || ||||| Sbjct 16226213 AAGATCTGCAT 16226203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357321280611260