Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq6 131 2e-25 seq11 118 1e-21 seq14 107 2e-18 seq8 107 2e-18 seq5 82.4 9e-11 >seq6 Length=25289714 Score = 131 bits (144), Expect = 2e-25 Identities = 148/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| |||||||| |||| ||||||||||| |||||||| Sbjct 179461 CTCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 179402 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || ||||||||| |||||| ||||| ||| Sbjct 179401 GATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 179343 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| ||||| || || | || ||||| || ||||| || ||||| | Sbjct 179342 TGTCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGTTAGGGTTTTGA 179283 Query 46581 CAAAGATTTGCATTTT 46596 | ||||| ||||| || Sbjct 179282 CGAAGATCTGCATCTT 179267 >seq11 Length=15446199 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| |||| | || | |||| ||||||||||| |||||||| Sbjct 13441817 CTCCTTCTGGATGTTGTAATCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAA 13441758 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||| || | ||| | | ||||||||| |||||| ||||| ||| Sbjct 13441757 GATGAGGCGCTGCTGATCCGGCGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTGA-CGT 13441699 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| ||||| |||| |||||| ||||| || ||||| |||| Sbjct 13441698 TGTCTATGGTGTCTGAGCTC---TCCACCTCCAGCGTGATCGTTTTTCCGGTCAGAGTTT 13441642 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||| ||||| Sbjct 13441641 TCACGAAGATCTGCAT 13441626 Score = 114 bits (126), Expect = 1e-20 Identities = 159/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| ||| | || |||||||| ||||||||||||| |||||| | | Sbjct 13442068 CGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCA 13442009 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || || || || |||||||| ||||| | ||||| |||| ||| | | |||||| Sbjct 13442008 TCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTG 13441949 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| || || ||||| ||| | | | ||||| |||| ||||| || | || Sbjct 13441948 TCCTGAATTTTAGCCTTGA-CGTTGTCTATGGTGTCTGAGCTC---TCCACCTCGAGGGT 13441893 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| ||||| ||||| |||||||| ||||| Sbjct 13441892 GATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| |||| | || | |||| ||||||||||| |||||||| Sbjct 13441589 CTCCTTCTGGATGTTGTAATCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAA 13441530 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||| || | ||| | | ||||||||| |||||| ||| | | Sbjct 13441529 GATGAGGCGCTGCTGATCTGGCGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTT 13441470 Query 46522 CGCCACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||||| ||| || || |||| |||||| ||||| ||||| || ||||| Sbjct 13441469 ATCTATCGTGTCGGAACTC---TCAACCTCCAGCGTGATCGTTTTTCCCGTTAGGGTTTT 13441413 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 13441412 CACAAAAATCTGCAT 13441398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | | ||||||||| |||| ||| ||||||||| ||||| ||||| | Sbjct 13253851 CCTCCTCTCAGTCTCAACACCAGGTGCAGTGTCGACTCCTTTTGAATATTATAGTCAGCG 13253910 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || ||||||||||| || || || ||||| ||||| || || | || Sbjct 13253911 AGGGTCCTGCCATCCTCGAGCTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGGGGA 13253970 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||| || ||| || ||| | | | | ||||| |||| || Sbjct 13253971 ATCCCTTCCTTATCTTGGATTTTGGCCTTAACATTGTCAATAGTGTCCGAGCTC---TCA 13254027 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||| || ||||||| || |||||||| || ||||| Sbjct 13254028 ACCTCCAATGTTATGGTCTTCCCCGTCAAGGTCTTAACAAAAATCTGCAT 13254077 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | |||| |||||||||||||||||| || | || || || | || || Sbjct 11225269 ACAAGGTGGAGTGTAGACTCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCA 11225210 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || || || ||||| | |||||| || | || | | ||||||||| | Sbjct 11225209 AGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGG 11225150 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 |||||| |||| | | | || || |||| ||||| || | ||||| || Sbjct 11225149 ATCTTCGCTTTGACATTGTCAATGGTATCTGAGCTC---TCCACCTCAAGAGTGATAGTC 11225093 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || ||||| || ||||| ||||| || |||||| Sbjct 11225092 TTCCCCGTAAGGGTTTTCACAAAAATCTGCATT 11225060 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | | ||||||||| || | || ||||||||| ||||| ||||| | Sbjct 13253623 CCTCCTCTCAGTCTCAACACCAGGTGGAGAGTCGACTCCTTTTGAATATTATAGTCAGCA 13253682 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | |||| || |||||||| || || || ||||| ||||||||||| | || Sbjct 13253683 AGGGTCCTGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGAGGA 13253742 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCC 46543 | || |||||||| ||||| ||| | | | | || || ||| || Sbjct 13253743 ATGCCTTCCTTGTCTTGAATCTTTGCCTTCACATTGTCTATTGTATC---CGAACTCTCA 13253799 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||||| || || || |||| || || |||||||| ||||| Sbjct 13253800 ACCTCCAAAGTGATTGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253849 Score = 86.0 bits (94), Expect = 7e-12 Identities = 138/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| |||| || || | |||| ||||||||||| |||||||| Sbjct 13441360 TCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAG 13441301 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | || | | ||||| ||| ||||||| ||||| | Sbjct 13441300 ATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGGATCTTCGCCTTGACGTTA 13441241 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | || || |||| || || || | || ||||| ||||| || | ||||| Sbjct 13441240 TCGATGGTATCGGAGCTC---TCGACTTCGAGGGTAATGGTCTTGCCGGTTAAGGTTTTC 13441184 Query 46580 ACAAAGATTTGCATTTT 46596 |||||||| ||||| || Sbjct 13441183 ACAAAGATCTGCATCTT 13441167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | |||| |||||||||||||||||| || | || || || | || || Sbjct 11225497 ACAAGGTGGAGTGTAGACTCCTTTTGGATATTGTAATCAGCAAGGGTTCGGCCATCTTCA 11225438 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||| || || ||||| | ||||||||| | || | | ||||||||| | Sbjct 11225437 AGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGG 11225378 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 || || ||| | | | | || || |||| || || |||| || || || Sbjct 11225377 ATTTTTGCCTTAACATTGTCAATGGTATCTGAGCTC---TCAACTTCCAGAGTAATCGTC 11225321 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || ||||| || ||||| ||||| || |||||| Sbjct 11225320 TTCCCCGTAAGGGTTTTCACAAAAATCTGCATT 11225288 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || |||||||| |||| ||| || | | || || | ||| || || ||||| Sbjct 13445116 TCCTTCTGAATATTGTAATCGGCTAGGGTTCTGCCATCCTCCAACTGTTTCCCAGCGAAA 13445057 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||| || | || | | ||||||||| |||||| ||| | | Sbjct 13445056 ATCAGACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTG 13444997 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| | ||| || || | || || |||||||| || || ||||| ||| Sbjct 13444996 TCGATGGTGTCTGAGGTTTCGACTTCGAGAGTAATTGTTTTGCCAGTTAGGGTTTTCACA 13444937 Query 46583 AAGATTTGCATTTT 46596 ||||||||||| || Sbjct 13444936 AAGATTTGCATCTT 13444923 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || ||||| |||||||| | || |||||||||||| |||||||| | Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || ||||| || || || || ||||| || |||||||| | || Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA---TTC 46542 | | || |||||| || || ||||| ||| | | | || || ||| || Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTTTGCCTTGA-CGTTGTCTATTGTATC---CGAACTCTC 13253570 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||| || || |||| || || |||||||| ||||| Sbjct 13253571 AACCTCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 >seq14 Length=4882680 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||| || | ||| |||||| || || |||||||||| || ||||| | Sbjct 1411433 CGCAGGACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCA 1411492 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| ||||| |||| | ||||||||| | || | | |||||| Sbjct 1411493 TCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTG 1411552 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| |||||| ||||| ||| | | | ||||| ||| |||||| || | || Sbjct 1411553 TCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGCT---TTCCACCTCAAGGGT 1411608 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || ||||| || || || || || ||||| |||||| Sbjct 1411609 GATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 1411648 >seq8 Length=21523998 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || || || || || ||||||||||| | |||||| ||||| || |||||||||||| Sbjct 16226399 GTGCTTTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCG 16226340 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG-ATCTTCTTCTT 46515 |||||||||| || || ||||| | || || | || ||| | | || || || ||| Sbjct 16226339 GCGAATATCAGTCGTTGTTGGTCCGGAGGAAC-CCCTTCTTTTTCTTGAATTTTGGACTT 16226281 Query 46516 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | | | || ||||| | |||||||||| || |||||||| || |||| || Sbjct 16226280 CACATTTTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGT 16226221 Query 46576 TTTAACAAAGATTTGCAT 46593 ||||| ||||| ||||| Sbjct 16226220 CTTAACGAAGATCTGCAT 16226203 >seq5 Length=18898134 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || || | |||| ||||| ||||||||||| || | ||||| ||| | || || Sbjct 2599351 ACAAGGTGGAGTGTAGATTCCTTCTGGATATTGTAATCTGCAAGAGTTCGCCCATCCTCA 2599410 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || || ||||| | || ||||| || | ||| | | ||| |||||| | Sbjct 2599411 AGTTGCTTCCCAGCAAATATTAGCCGTTGCTGATCAGGCGGAATCCCCTCTTTGTCCTGG 2599470 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| |||| | | | || || |||| || || || | ||||||||| Sbjct 2599471 ATCTTTGCTTTGACATTGTCAATGGTATCTGAGCTC---TCAACCTCAAGAGTGATGGTT 2599527 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| ||||| || ||||| Sbjct 2599528 TTCCCAGTAAGGGTTTTCACAAAAATCTGCAT 2599559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565123684866720