Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 129 7e-25 seq3 127 3e-24 seq14 116 5e-21 seq15 114 2e-20 seq13 109 7e-19 seq2 100 4e-16 >seq6 Length=25289714 Score = 129 bits (142), Expect = 7e-25 Identities = 235/337 (70%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT--TTCGTTATCAA 15975 ||||| ||||| | || || ||||| || || |||| ||||| || ||| || ||| Sbjct 23328587 TCAAGAATATCTGCACGGTTAGTTGCTGCAATTACAATTATACCGGTATTTCCTT--CAA 23328530 Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035 |||||||||| |||||||| |||||||| | || || |||| ||||||||| || Sbjct 23328529 AACCATCCATTTCTGTCAAGAGCTGGTTCAGGGTCTGCTCCCTTTCATCATTTCCTCCAC 23328470 Query 16036 TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095 | ||||| | | ||| || || |||||||| ||||||| ||||| ||||| | Sbjct 23328469 CAATACCAGTTCCTCTTTGACGCCCAACAGCATCAATTTCATCAACAAAGACAATGCAGG 23328410 Query 16096 GTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACA 16154 | |||||| | | ||| ||| ||||| || || || || || || |||||| Sbjct 23328409 GAGCATTTTCCTTCGCCTTCTTGAAA-AGATCACGGACCCGTGAAGCCCCAACTCCAACA 23328351 Query 16155 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 16213 |||||||| ||||| | | | ||| || | || || || ||| | |||||| || Sbjct 23328350 AACATCTCAACAAACTCAGAACCTGAA-ATCGAGAAAAAAGGAACACCGGCTTCACCAGC 23328292 Query 16214 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 16250 ||| || ||| || | ||||| || ||||||||| Sbjct 23328291 AATAGCCTTGGCTAGCAAGGTCTTTCCAGTACCTGGC 23328255 >seq3 Length=24928530 Score = 127 bits (140), Expect = 3e-24 Identities = 199/281 (71%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| |||||||| || ||||| ||||| ||||| || || || | ||||||||| | Sbjct 23876494 AAATCCATCCATTTCCGTCAACAGCTGATTAATGGTCTGCTCTCTCTCATCATTCCCACC 23876435 Query 16034 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | ||| || | | ||| |||||||||||||||||||||||||||| || || || Sbjct 23876434 ACCAAGACCTGCTCCTCTCTGCCTTCCCACGGCATCAATCTCATCAATGAACACAATACA 23876375 Query 16094 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACAC 16149 ||| ||||| | || ||||| | ||||| ||| |||| || || |||| Sbjct 23876374 AGGT--GCTTTCGACTTGGCCTTCTCAAACAAATCCC--TCACTCTTGAAGCTCCTACAC 23876319 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 16209 | ||||||| ||||||||| | || || | |||| || ||||| || || |||| Sbjct 23876318 CCACAAACAGCTCCACAAACTCTGATGCTGCACATGAGAAAAAGGGCACCCCAGCCTCAC 23876259 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 16250 | || | ||||| || || || ||||| || ||||| ||| Sbjct 23876258 CAGCCACGGCTCTTGCCAGGAGGGTCTTCCCAGTACCCGGC 23876218 >seq14 Length=4882680 Score = 116 bits (128), Expect = 5e-21 Identities = 282/419 (67%), Gaps = 6/419 (1%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGT-TTCGTTATCAAA 15976 || || |||||| | || || || || || || |||| ||||| || ||| | ||||| Sbjct 2614418 TCGAGAATATCAGCACGGTTAGTAGCTGCAATAACAATTATACCAGTATTCCCT-TCAAA 2614360 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 16036 ||||||||| |||||||| |||||||| | ||||| |||| ||||||||| || Sbjct 2614359 ACCATCCATTTCTGTCAAGAGCTGGTTTAGCGTTTGCTCCCTTTCATCATTGCCTCCACC 2614300 Query 16037 ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096 | ||||| | | ||| || || |||||||| ||||||| || || ||||| || Sbjct 2614299 AATACCAGTTCCTCTTTGACGGCCAACAGCATCAATTTCATCAACAAACACAATGCAGGG 2614240 Query 16097 TTGATTTT-CGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAA 16155 ||||| | | | ||| ||| ||||| || || | ||| || || ||||||| Sbjct 2614239 AGCATTTTCCTTGGCCTTCTTGAAA-AGATCACGGACTCTTGAGGCACCGACTCCAACAA 2614181 Query 16156 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 16214 ||||||| ||||| | | | ||| || | || || || ||| | |||||| || Sbjct 2614180 ACATCTCAACAAACTCAGAACCTGAA-ATCGAGAAAAATGGAACACCTGCTTCACCAGCG 2614122 Query 16215 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGT 16274 || || || || | ||||| || |||||||| ||| | || || | || Sbjct 2614121 ATTGCCTTTGCTAGCAATGTCTTTCCAGTACCTGGAGGACCAACAAGAAGAACTCCCTTA 2614062 Query 16275 GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 ||||| ||||| || | |||||||||| | ||| || || ||||| | ||| Sbjct 2614061 GGAATACGAGCGCCCACAGCAGTGAATCTCTCAGGCTTCTTCAGGAATTCCACCACCTC 2614003 >seq15 Length=10047770 Score = 114 bits (126), Expect = 2e-20 Identities = 583/912 (64%), Gaps = 27/912 (3%) Strand=Plus/Minus Query 101721 GAACCTCTCCTAGCCCCCACACTAAACAGATTTACTG--TGTTCCCCCTGAAGTATCCAC 101778 ||||||||||| ||||||| | || | || ||| |||||||| | |||| |||| Sbjct 1769916 GAACCTCTCCTCGCCCCCAACCCCGACCGCTT--CTGCATGTTCCCCATCCAGTACCCAC 1769859 Query 101779 ACCTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATT--GGACTGCTGAAGAGGTAGA 101836 | |||||||| | || ||||| || || | || || ||||||| || || || || Sbjct 1769858 AAATCTGGGAAATGTACAAGAAAGCCGAA--GCGTCCTTCTGGACTGCGGAGGAAGTGGA 1769801 Query 101837 TCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAAGAAATTCATAAA 101896 | | || | || | | | ||| | | || | | | || ||| | ||||| || Sbjct 1769800 TTTGTCCCAAGACCTCCGCCACTGGGAAAACCTCACTTCTGACGAGAAGCATTTCATCAA 1769741 Query 101897 ATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAA 101956 | || | || || ||||| || | || ||||| |||||||| ||||| | | Sbjct 1769740 ACACGTTCTCGCCTTCTTCGCCGCCTCTGATGGCATTGTTTTGGAGAACCTTGCTGGACG 1769681 Query 101957 CTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAA--TGTCAT 102014 ||| | || || || ||| || || | | ||||||| || ||| || ||| Sbjct 1769680 CTTCATGAAGGAAGTTCAGGTCTCCGAGGCTCGTGCCTTCTATGGGTTTCAGATTGCCAT 1769621 Query 102015 AATGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGT 102074 ||| | | ||| |||| || ||| | | || ||||| |||||| Sbjct 1769620 --TGAGAACATCCATTCCGAGATGTATAGTCTTTTGCTTGAATCCTATATAAAGGATTCG 1769563 Query 102075 GCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCG 102134 || |||||||| ||| ||| || ||| | || || |||||| | | ||||| || Sbjct 1769562 GCCGAGAAGAACATGCTTTTTCGCGCAATCGAGACTGTCCCATGTGTGGAGAAGAAGGCT 1769503 Query 102135 GATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 102194 | |||||| | ||| | ||| || | ||||| || ||| | ||| | Sbjct 1769502 AAATGGGCTTTACGCTGGATCGATGGC---TCTGAAACTTTTGCCGAACGATTAATCGGA 1769446 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 102254 ||||| ||||| || || || || ||||| || |||||| || || | |||||| ||| Sbjct 1769445 TTTGCTTGTGTGGAAGGCATATTTTTCTCGGGAAGCTTCTGTGCAATATTTTGGCTGAAG 1769386 Query 102255 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 102314 ||||| ||| | ||||| ||| | ||||||||||| | ||||| || || ||||| Sbjct 1769385 AAGCGTGGTTTGATGCCGGGTTTAACTTTCTCCAACGAATTAATCTCACGGGATGAGGGT 1769326 Query 102315 CTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAA-ACCAACGACTGA 102373 | ||| || |||||| |||| | || ||| || || | ||| || Sbjct 1769325 TTGCACTGCGATTTTGCGTGCTTGCTTTATAGTTTGTTGAAAATGAAGTTGAGCGA-GGA 1769267 Query 102374 GACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGA-TTCATATTGGATG 102432 || | | | || || ||| || || || ||||| |||||| || | | |||| Sbjct 1769266 GAAAGTGAAGGCGATAGTGGCGGACGCGGTGGACATTGA-AAGGGAGTTTGTGTGCGATG 1769208 Query 102433 CCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTATG 102492 | || || ||||| | | || |||||| ||| |||| | || ||| ||| || Sbjct 1769207 CGCTGCCTTGCGCGTTGGTGGGGATGAATGGAGAATTGATGAGTCAGTACATTAAGTTTG 1769148 Query 102493 TATCTGATAGATTGTTGAA-GCAGATCGGGGTGCCTCCAATTTG---GAACTCCAAGAAT 102548 | ||||||||||| |||| || || ||||| || ||| | ||||| || Sbjct 1769147 TGGCTGATAGATTGCTGAATGC--ATTGGGGT-ATGGGAAGTTGTATTATGTCCAA-AAC 1769092 Query 102549 CCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGG 102608 || ||||| | |||||| || || | | |||||||| || ||||| || || || Sbjct 1769091 CCGTTTGATTGGATGGAGTTAATAAGTTTGCAAGGGAAGACTAATTTCTTTGAGAAAAGA 1769032 Query 102609 GTTGGGGACTAT 102620 || ||||| ||| Sbjct 1769031 GTGGGGGAGTAT 1769020 >seq13 Length=5050363 Score = 109 bits (120), Expect = 7e-19 Identities = 573/907 (63%), Gaps = 17/907 (2%) Strand=Plus/Plus Query 101721 GAACCTCTCCTAGCCCCCACACTAAACAGATTTACTGTGTTCCCCCTGAAGTATCCACAC 101780 ||||||||||| || |||| | || | || | |||||||| | | || ||||| Sbjct 3175609 GAACCTCTCCTCGCTCCCAACCCCGACCGCTTCTGTATGTTCCCCATTCACTACCCACAG 3175668 Query 101781 CTCTGGGAACTCTATAAGAAGGCTCAAATGAGTAATT--GGACTGCTGAAGAGGTAGATC 101838 ||||||| | || || || || || | | || |||| || || || || ||| Sbjct 3175669 GTCTGGGAGATGTACAAAAAAGCAGAA--GCTTCCTTCTGGACCGCCGAGGAAGTTGATT 3175726 Query 101839 TCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAAAATGAAAAGAAATTCATAAAAT 101898 | || |||| | | ||||| | | || | | || ||| | ||| | ||| Sbjct 3175727 TATCTCAGGACCTCCGCCATTGGGAAGCCCTCACCTCCGACGAGAAGCATTTCGTCAAAC 3175786 Query 101899 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACT 101958 || |||| || |||||||||| |||||||| || ||||| || ||| || | || Sbjct 3175787 ACGTCCTCGCCTTCTTTGCTGCCTCCGATGGTATCGTTTTGGAAAATCTCGCTGGACGCT 3175846 Query 101959 TTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAA--TGTCATAA 102016 | | ||||| || ||| || || | | ||||| | | ||| || ||| Sbjct 3175847 TCATGAAAGAGGTCCAGATCTCCGAGGCCCGTGCCTTCTACGGCTTCCAAATTGCCAT-- 3175904 Query 102017 TGAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 102076 ||| | | ||| |||| |||||| || | || || || || || || Sbjct 3175905 TGAGAACATTCATTCCGAGATGTACAGTCTTCTGCTTGAGTCTTACATCAAAGACTCGGC 3175964 Query 102077 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGA 102136 ||||| || || ||||| || || | || ||||| || | ||||||| || | Sbjct 3175965 CGAGAAAAACCACCTCTTCCGCGCAATTGAGACCGTTCCTTGCGTGGAAAAGAAGGCCAA 3176024 Query 102137 TTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATT 102196 ||||| ||| ||| ||||| || |||||||||||||| | |||| || Sbjct 3176025 GTGGGCCATGCGCTGGATTGATGGC---TCTGAATCCTTTGCTGAGCGGTTAGTCGCCTT 3176081 Query 102197 TGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAA 102256 ||| ||||||||||| || || ||||| || ||||||||| || | |||| | || || Sbjct 3176082 TGCTTGTGTTGAGGGGATATTTTTCTCGGGGAGCTTCTGCGCCATATTTTGGTTGAAAAA 3176141 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 ||| || | ||||| || | |||||||| || | || || || || || || | Sbjct 3176142 GCGCGGGATGATGCCGGGCTTGACTTTCTCCAATGAATTAATTTCGCGAGATGAAGGTTT 3176201 Query 102317 CCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAACCAACGACTGAGAC 102376 || || |||||| |||| || || ||| || || | | |||| Sbjct 3176202 GCATTGTGATTTTGCGTGCCTGCTTTACAGTTTGTTGAAAATGAAGCTGAGTGAGGAGAA 3176261 Query 102377 TATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGATGCCCT 102436 | | || || ||| || || | || |||| || || | | ||||| || Sbjct 3176262 AGTGAAAGGAATAGTGGCGGACGCAGTGAATATAGAGAGGGAGTTTGTGTGTGATGCGCT 3176321 Query 102437 TCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTATGTATC 102496 || ||||| || | || |||||| || |||| | | || ||||| | ||| | Sbjct 3176322 GCCTTGCGCGCTGGTGGGGATGAATGGAGATTTGATGAGCCAGTACATTGAATTTGTGGC 3176381 Query 102497 TGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAATTTGGAAC---TCCAAGAATCCATT 102553 ||||||| ||||||| | | ||| || ||| | | | | |||||||||| Sbjct 3176382 TGATAGACTGTTGAA--TGCTTTGGGCTATGGAAAGTTGTACCATGTGC-AGAATCCATT 3176438 Query 102554 TGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGG 102613 ||| | ||||| ||||| | | ||||| ||||||||||| || ||||||||||| Sbjct 3176439 TGATTGGATGGAATTGATTAGTTTGCAAGGGAAAACAAACTTCTTTGAGAAGAGGGTTGG 3176498 Query 102614 GGACTAT 102620 ||| ||| Sbjct 3176499 GGAATAT 3176505 >seq2 Length=18500646 Score = 100 bits (110), Expect = 4e-16 Identities = 252/376 (67%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| |||||||| || ||||| ||||| |||||||| || || | ||||||||| | Sbjct 3972028 AAATCCATCCATTTCAGTCAAGAGCTGATTAATAGTCTGCTCTCTTTCATCATTTCC--- 3971972 Query 16034 CATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 | |||| || || | | |||| | ||||| |||||||| ||||||||||| || || Sbjct 3971971 CCCACCAAGTCCTGCCCCTCTTTGCCTACCCACAGCATCAATTTCATCAATGAACACAAT 3971912 Query 16091 GCATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCA 16146 ||| || | ||| | | | || ||||| | ||||| ||| |||| || || | Sbjct 3971911 GCAAGG-AGCTTTAGACTTG-GCCTTATCAAACAAATCCC--TCACTCTTGAAGCTCCAA 3971856 Query 16147 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATT 16206 |||| ||||||| ||| ||||| | || || | ||| | ||| || || | || Sbjct 3971855 CACCTACAAACAACTCTACAAACTCTGATGCAGCACAGGAAAAGAACGGTACCCCTGCTT 3971796 Query 16207 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 16266 |||| || | || | || | ||| ||||| || ||||| || ||| | | || Sbjct 3971795 CACCAGCCACTGCCCTTGCCAAAAGGGTCTTTCCAGTACCGGGTGGACCAACCAAAAGAC 3971736 Query 16267 CACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 |||| ||||| || || || | || ||| | ||||| | || | ||||| | Sbjct 3971735 AACCTTTCGGAATTTTTGCACCCAATGCAGTGTACTTATCAGGGTTTTTCAAGAAATCAA 3971676 Query 16327 CAATCTCTTCCAATTC 16342 | | ||||| ||| || Sbjct 3971675 CTACCTCTTGCAACTC 3971660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620616420329920