Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=24928530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/298 (68%), Gaps = 16/298 (5%) Strand=Plus/Minus Query 11593 AAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGC 11652 || || |||||||| || | ||||| || || ||||| || | |||||| || | Sbjct 23876493 AATCCATCCATTTCCGTCAACAGCTGATTAATGGTCTGCTCTCTCTCATCATTCC----C 23876438 Query 11653 AT-ACCA---CCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGAT 11708 | |||| ||||| | || | | || || || ||||||||||| ||||| || || Sbjct 23876437 ACCACCAAGACCTGCTCCTCTCTGCCTTCCCACGGCATCAATCTCATCAATGAACACAAT 23876378 Query 11709 ACACGGTTGGTTGGCACGT-GCCTGTTCGAAAAGTTCACGTACACGCTT--CGCTCCAAC 11765 ||| || || || || | |||| || || | || | ||| ||| ||||| || Sbjct 23876377 ACAAGG-TGCTTTCGACTTGGCCTTCTCAAACAAATCCC--TCACTCTTGAAGCTCCTAC 23876321 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACT 11824 ||| || |||| ||| || || | || || | ||| ||| | ||||| || || || Sbjct 23876320 ACCCACAAACAGCTCCACAAACTCTGATGCTGCACA-TGAGAAAAAGGGCACCCCAGCCT 23876262 Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882 ||||||| | ||||| || ||||| ||||| || ||||| || | |||| | | ||| Sbjct 23876261 CACCAGCCACGGCTCTTGCCAGGAGGGTCTTCCCAGTACCCGGCGGACCAACCAAAAG 23876204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588856467320800