Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq15 138 1e-27 seq3 134 2e-26 seq14 131 2e-25 seq6 125 8e-24 seq9 102 1e-16 seq2 100 3e-16 >seq15 Length=10047770 Score = 138 bits (152), Expect = 1e-27 Identities = 402/614 (65%), Gaps = 9/614 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||||||| || || || | ||| || ||||| || || Sbjct 1769309 GCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTTAAACCC 1769368 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| |||||||||| |||| | || || ||||| || ||||| || || Sbjct 1769369 GGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAAAATATG 1769428 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAAC 117453 || |||||||| ||||| | | | || ||||| || | ||| || | | Sbjct 1769429 CCTTCCACACAAGCAAATCCGATTAATCGTTCGGCAAAAGTTTCAGAGCCA---TCGATC 1769485 Query 117454 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 117513 || | |||||||| ||||||||||| | |||||| ||||| | ||| || ||| Sbjct 1769486 CAGCGTAAAGCCCATTTAGCCTTCTTCTCCACACATGGGACAGTCTCGATTGCGCGAAAA 1769545 Query 117514 AACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCG 117573 | | ||||| || | |||||| || || |||| ||| ||| | ||| Sbjct 1769546 AGCATGTTCTTCTCGGCCGAATCCTTTATATAGGATTCAAGCAAAAGACTATACATCTCG 1769605 Query 117574 CCATGAACCATTTCATTATGGCATT--GATATGCGTAGAATGAGCGCGCTTCGCTTATCT 117631 ||| | | ||| |||||| | || | | ||||| | || || ||| | || Sbjct 1769606 GAATGGATGTTCTCA--ATGGCAATCTGAAACCCATAGAAGGCACGAGCCTCGGAGACCT 1769663 Query 117632 GCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 117691 | ||||| | | || | | ||||| |||||||| ||||| || | || | Sbjct 1769664 GAACTTCCTTCATGAAGCGTCCAGCAAGGTTCTCCAAAACAATGCCATCAGAGGCGGCGA 1769723 Query 117692 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGGGTCTTCCAGTCGT 117751 |||| || || | || || ||||| | ||| || | | | ||| | | ||||| | Sbjct 1769724 AGAAGGCGAGAACGTGTTTGATGAAATGCTTCTCGTCAGAAGTGAGGTTTTCCCAGTGGC 1769783 Query 117752 CAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCTTTTTAT 117811 || |||| ||||||||| ||||| ||||||||||| | | || || || || | Sbjct 1769784 GGAGGTCTTGGGACAAATCCACTTCCTCCGCAGTCCAGAAGGACGCTTCGGCTTTCTTGT 1769843 Query 117812 AGAGTTCCCAGAGTTGTGGATACTTCAGGGGGAAGACTGTA-AATCTGTTTAGGGTGGGG 117870 | | |||||||| |||||| |||| | |||||| | || | || | || || ||||| Sbjct 1769844 ACATTTCCCAGATTTGTGGGTACTGGATGGGGAACA-TGCAGAAGCGGTCGGGGTTGGGG 1769902 Query 117871 GCCAGAATAGGTTC 117884 || || | |||||| Sbjct 1769903 GCGAGGAGAGGTTC 1769916 >seq3 Length=24928530 Score = 134 bits (148), Expect = 2e-26 Identities = 198/278 (71%), Gaps = 2/278 (1%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| |||||||| || ||||| || || ||||| || || || | ||||||||| | Sbjct 23876494 AAATCCATCCATTTCCGTCAACAGCTGATTAATGGTCTGCTCTCTCTCATCATTCCCACC 23876435 Query 9341 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 | ||| || | | ||| |||||||||||||||||||||||||||| |||||||| Sbjct 23876434 ACCAAGACCTGCTCCTCTCTGCCTTCCCACGGCATCAATCTCATCAATGAACACAATACA 23876375 Query 9401 TGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAA 9459 || || ||| | ||| | ||||| | ||| | || ||| || || ||||| | Sbjct 23876374 AGG-TGCTTTCGACTTGGCCTTCTCAAACAAATCCCTCACTCTTGAAGCTCCTACACCCA 23876316 Query 9460 CAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCG 9519 |||||| ||||||||| | || || | |||| || ||||| || || ||||| | Sbjct 23876315 CAAACAGCTCCACAAACTCTGATGCTGCACATGAGAAAAAGGGCACCCCAGCCTCACCAG 23876256 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557 | | ||||| || || || ||||| || ||||| ||| Sbjct 23876255 CCACGGCTCTTGCCAGGAGGGTCTTCCCAGTACCCGGC 23876218 >seq14 Length=4882680 Score = 131 bits (144), Expect = 2e-25 Identities = 283/418 (68%), Gaps = 4/418 (1%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT-TTCATTATCAAA 9283 || || |||||| | || || || || || || |||| ||||| || ||| | ||||| Sbjct 2614418 TCGAGAATATCAGCACGGTTAGTAGCTGCAATAACAATTATACCAGTATTCCCT-TCAAA 2614360 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCAT 9343 ||||||||| |||||||| || ||||| | ||||| |||| ||||||||| || Sbjct 2614359 ACCATCCATTTCTGTCAAGAGCTGGTTTAGCGTTTGCTCCCTTTCATCATTGCCTCCACC 2614300 Query 9344 ACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGG 9403 | ||||| | | ||| || || |||||||| ||||||| || ||||| || || Sbjct 2614299 AATACCAGTTCCTCTTTGACGGCCAACAGCATCAATTTCATCAACAAACACAATGCAGGG 2614240 Query 9404 TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAA 9463 |||||| ||| | | || ||||| || || ||| ||| || || |||||||| Sbjct 2614239 AGCATTTTCCTTGGCCTTCTTGAAAAGATCACGGACTCTTGAGGCACCGACTCCAACAAA 2614180 Query 9464 CATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAA 9522 |||||| ||||| | | | ||| || | || || || ||| | |||||| || | Sbjct 2614179 CATCTCAACAAACTCAGAACCTGAA-ATCGAGAAAAATGGAACACCTGCTTCACCAGCGA 2614121 Query 9523 TGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTG 9582 | || || || | ||||| || |||||||| ||| | || || | ||| | Sbjct 2614120 TTGCCTTTGCTAGCAATGTCTTTCCAGTACCTGGAGGACCAACAAGAAGAACTCCCTTAG 2614061 Query 9583 GAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 |||| ||||| || | |||||||||| | ||| || || ||||| | ||| Sbjct 2614060 GAATACGAGCGCCCACAGCAGTGAATCTCTCAGGCTTCTTCAGGAATTCCACCACCTC 2614003 >seq6 Length=25289714 Score = 125 bits (138), Expect = 8e-24 Identities = 232/336 (69%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAA 9282 ||||| ||||| | || || || || || || |||| ||||| || ||| || ||| Sbjct 23328587 TCAAGAATATCTGCACGGTTAGTTGCTGCAATTACAATTATACCGGTATTTCCTT--CAA 23328530 Query 9283 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9342 |||||||||| |||||||| || ||||| | || || |||| ||||||||| || Sbjct 23328529 AACCATCCATTTCTGTCAAGAGCTGGTTCAGGGTCTGCTCCCTTTCATCATTTCCTCCAC 23328470 Query 9343 TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATG 9402 | ||||| | | ||| || || |||||||| ||||||| |||||||| || | Sbjct 23328469 CAATACCAGTTCCTCTTTGACGCCCAACAGCATCAATTTCATCAACAAAGACAATGCAGG 23328410 Query 9403 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAA 9462 | |||||| || | | || ||||| || |||| | || || || ||||||| Sbjct 23328409 GAGCATTTTCCTTCGCCTTCTTGAAAAGATCACGGACCCGTGAAGCCCCAACTCCAACAA 23328350 Query 9463 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 9521 ||||||| ||||| | | | ||| || | || || || ||| | |||||| ||| Sbjct 23328349 ACATCTCAACAAACTCAGAACCTGAA-ATCGAGAAAAAAGGAACACCGGCTTCACCAGCA 23328291 Query 9522 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9557 || || ||| || | ||||| || ||||||||| Sbjct 23328290 ATAGCCTTGGCTAGCAAGGTCTTTCCAGTACCTGGC 23328255 >seq9 Length=12411895 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || ||||||||||| ||||||||||| ||||| || | ||| ||| ||||| | || Sbjct 8673304 TGTGGTCTTGGTGTTCCAGCATTGAAAAGGGTAGGAGATGCATGAGTGAACCATCGCTGA 8673245 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||| | | ||||| | | || |||||||| || ||| |||||| || | ||| Sbjct 8673244 GACAACAGATGATATGTTTTTATAACTGAATCAATATCATCCTTGTGGATACCAACGGCA 8673185 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGATA 107346 || | ||| ||||||| ||| || | || | | |||| | || || || | || || Sbjct 8673184 ACCCTCATCAACATGTGTTGAGGCCTCTCAACAACCTTGCCTTGGA-CCTTTAACAGGTA 8673126 Query 107347 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTC 107391 | | ||||||||||||| ||||||||| || | ||| |||| Sbjct 8673125 AGACCTTTCAAGGGTTTTGAATCCAAAGTAATCATAGTCAAAGTC 8673081 >seq2 Length=18500646 Score = 100 bits (110), Expect = 3e-16 Identities = 229/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTG--TTTCATTATCA 9281 |||||| | ||| | ||| ||||| || | ||| | || ||| | || | | | | Sbjct 3972085 ATCAAGAACATCCGGCCTATTGGTCGCTGCCAAGACTATAACACCAGAATTACCTGA--A 3972028 Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || |||||||| || ||||| || || |||||||| || || | ||||||||| | | Sbjct 3972027 AATCCATCCATTTCAGTCAAGAGCTGATTAATAGTCTGCTCTCTTTCATCATTTCC---C 3971971 Query 9342 ATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 |||| || || | | |||| | ||||| |||||||| ||||||||||| ||||| Sbjct 3971970 CCACCAAGTCCTGCCCCTCTTTGCCTACCCACAGCATCAATTTCATCAATGAACACAATG 3971911 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | ||| | ||||| | ||| | || ||| || || ||||| Sbjct 3971910 CAAGG-AGCTTTAGACTTGGCCTTATCAAACAAATCCCTCACTCTTGAAGCTCCAACACC 3971852 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||||| ||| ||||| | || || | ||| | ||| || || | |||||| Sbjct 3971851 TACAAACAACTCTACAAACTCTGATGCAGCACAGGAAAAGAACGGTACCCCTGCTTCACC 3971792 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || | || | || | ||| ||||| || ||||| || Sbjct 3971791 AGCCACTGCCCTTGCCAAAAGGGTCTTTCCAGTACCGGG 3971753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589861063396640