Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq16236 596 2e-165 seq8 334 9e-87 seq6 156 5e-33 seq2 116 4e-21 seq3 96.9 4e-15 >seq16236 Length=153324 Score = 596 bits (660), Expect = 2e-165 Identities = 724/984 (74%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| ||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 1393 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1334 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| || Sbjct 1333 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCCCC 1275 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | |||||||| | || || || | || |||||||| Sbjct 1274 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 1215 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || ||||||||||| || |||| |||| || |||||| | ||||| |||||||| Sbjct 1214 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAAT 1155 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||||||| | | ||||| |||||||| || ||||||||||| | | | | Sbjct 1154 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 1095 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | || ||||||||| | |||||||| | | | | Sbjct 1094 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1035 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| |||||||||| |||||| |||||||| || || | || || || Sbjct 1034 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 975 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | |||||| | ||||| || ||| ||||||||||||||||||||||| Sbjct 974 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 915 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 |||||| || |||||||||||| | |||||||| || ||||||||||| |||||||| || Sbjct 914 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 855 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 || || ||| ||| ||||| ||| | ||||| || || |||||| || |||||||| Sbjct 854 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 795 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || || || || | |||||| || | || Sbjct 794 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 735 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||||||||| |||||||| |||||||| || || || ||||| || || || Sbjct 734 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 675 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| ||||| |||||||||||||| | | |||||||||||||| Sbjct 674 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGC 615 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || || || || | ||||| || || | |||||| | || ||||| ||||| Sbjct 614 TGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAA 555 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 | | ||||| || || || |||||||| || || ||| | | || | ||| ||| Sbjct 554 CCTAAACGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATAC 495 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| ||| | | ||| | || ||||||||||||||||| |||||||| ||||| || Sbjct 494 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 435 Query 169450 TCACAACTTCCCACTAGACTTAGC 169473 ||| |||||||| |||||| |||| Sbjct 434 TCATAACTTCCCTCTAGACCTAGC 411 >seq8 Length=21523998 Score = 334 bits (370), Expect = 9e-87 Identities = 441/603 (73%), Gaps = 14/603 (2%) Strand=Plus/Plus Query 168874 TGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTC-CTTG-TATACCCATTT 168931 |||||| |||||||| | || | || || | || |||| |||| | |||||| | Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGC--TACCACTATTTTCTTGATCTACCCAATC 7119403 Query 168932 GGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATG 168991 | ||| || ||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 7119404 GATCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 7119463 Query 168992 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCA 169051 | |||||||| || |||||||||| |||||||| || || || ||| ||| ||||| Sbjct 7119464 ATTGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCT 7119523 Query 169052 GGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTA 169111 ||| | ||||| || || |||||| || ||||||||||| | ||||| ||| | | Sbjct 7119524 GGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 7119583 Query 169112 ATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 169171 ||||| || || || || | |||||| || | ||| ||| |||| ||| || Sbjct 7119584 ATCAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTC------AA 7119637 Query 169172 GAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 169231 ||||| |||||||| | ||||| ||||| || || || |||| |||||||| ||| | Sbjct 7119638 GAAACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA-TATACT 7119696 Query 169232 AGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTA 169291 |||||||||| ||| | | |||||||||||||| | | || | || || | Sbjct 7119697 AGTTTCAACAGCTC-CCATCATTACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATC 7119755 Query 169292 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAAC 169351 || || || || | |||||| | || ||||| |||||| | ||||| || || || ||| Sbjct 7119756 TGCTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAAC 7119815 Query 169352 CAATCAGTTGTAGAT-GTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAG 169410 ||||| || || ||| | || | | | | ||| ||| |||| ||| | | ||| | Sbjct 7119816 CAATCTGTAGTTGATAGCCAAGGCTGTG-TAATTAATACCTGGGTTGATATGATCAACCG 7119874 Query 169411 AGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTT 169470 || ||||||||||||||||| |||| ||| ||||| ||||| |||||||| |||||| | Sbjct 7119875 TGCTAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGACCT 7119934 Query 169471 AGC 169473 ||| Sbjct 7119935 AGC 7119937 >seq6 Length=25289714 Score = 156 bits (172), Expect = 5e-33 Identities = 188/256 (73%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 168784 GGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATC 168843 |||||| | |||||| ||| || | || ||||||||| | |||||||| | Sbjct 6246876 GGTAATTTAACACTTCTTAAATGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 6246935 Query 168844 ATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGC 168903 | | | || |||||| ||| |||||| |||||| ||| || | || || | || || Sbjct 6246936 TTTCCGTCTGGGTATGCGACATTGGATTGCTGTTGCATATCCAACTCCTGTTGCAGCTGC 6246995 Query 168904 ATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCT 168963 || || ||| | | |||||| | ||||| || ||| ||||||||||||||||| Sbjct 6246996 TACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCT 6247055 Query 168964 AGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTAT 169023 |||||||||||| || |||||||||||| | |||||||| || ||||| ||||| ||||| Sbjct 6247056 AGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAGAACATCCTTAT 6247115 Query 169024 GCATCCCTTCCATATG 169039 ||| || || || ||| Sbjct 6247116 GCACCCATTTCACATG 6247131 >seq2 Length=18500646 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207 |||||||| ||||||||||| |||||||| |||||||| || || || ||||| || || Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 169208 GGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC-AAGAAGTCTTCACTTCTTCCT 169266 || |||| |||||||| ||||| | |||||||||||| | || | ||||||||||| Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTCATCTGT-TACACTTCTTCCT 3034028 Query 169267 AGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATT 169326 || | | || || || | | |||| || || | |||||| | ||||| || Sbjct 3034027 AGTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTTAGGTATCAGCGATATGGCTTT 3033968 Query 169327 CAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGAT 169366 ||| || |||| || || || ||||| | || || ||| Sbjct 3033967 CAATTTAAACGATTTCAATTTCGACCAACCTGTAGTTGAT 3033928 >seq3 Length=24928530 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 169023 TGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAA 169082 |||| | || || ||| ||| |||| ||| | ||||| || || |||||| | | Sbjct 17256211 TGCACCTATTTCACATGTTAGGCATAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTA 17256270 Query 169083 TGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGA 169142 |||||||||| | ||||| || | ||||| || || || || | |||| | | Sbjct 17256271 TGCATGGTTCCTTGGTAACTTCAAGGTTGATCAGGGAAACCACAGAAAATGAATATGCTA 17256330 Query 169143 ACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGAT 169202 | | |||||||| ||||||||||| ||||||| |||||||| || | ||| ||||| | Sbjct 17256331 ATGAAGGTTACAAATTCGGTCAAGAGAAAGAAACTTATAATATCGTAGTAGCTCATGGTT 17256390 Query 169203 ACTTCGGTAGATTAATCT 169220 | || || |||| |||| Sbjct 17256391 ATTTTGGCCGATTGATCT 17256408 Score = 89.7 bits (98), Expect = 6e-13 Identities = 119/164 (73%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 168617 GATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATC 168676 ||||| || || | | |||||||| | || || || | |||||||||||||| ||| Sbjct 18510401 GATATTGATGGTTTTCGTGAACCTGTTTCTGGATCT-TACTTTATGGAAACAACATTATC 18510459 Query 168677 TCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAA 168736 ||| ||| || |||| |||| || |||||||| ||| | | ||||||||||||| Sbjct 18510460 TCAAGTGTCATTATTCCTACTTCTGCAGCTATCGGTCTCCACGTTTGCCCAATTTGGGAA 18510519 Query 168737 GCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCA 168780 ||| | | || ||||| |||||||| | || |||| || || Sbjct 18510520 GCATCACCCATTGATGAATGGTTATAAACCAGTAGTCCATATCA 18510563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564327046577280