Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq14 113 3e-20 seq11 107 1e-18 seq8 107 1e-18 seq6 96.9 2e-15 seq5 95.1 8e-15 >seq14 Length=4882680 Score = 113 bits (124), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||||| ||||||||| | || |||||||||||||| || |||| | | | || | Sbjct 1410748 CCTCAGAACCAAGTGCAGGGTAGACTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGGCC 1410807 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| |||| ||| ||||| ||||| || || | ||||||||| | || | ||||||||| Sbjct 1410808 ATCCTCCAACTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTT 1410867 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGG 34941 || |||||| || || || | ||||| || | |||||| || | || Sbjct 1410868 ATCTTGAATCTTGGCCTTCAC--AT--TGTCGATGGTATCGGAGCTCTCAACTTCAAGGG 1410923 Query 34942 TTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| || || ||||| ||||| ||||||||||||||| Sbjct 1410924 TGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATA 1410964 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| || ||||| ||||| ||||| | ||| |||| |||| || Sbjct 1410983 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTTCGCCCATCCTCG 1411042 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || || || || || | ||||||||| | || | ||||||||||| Sbjct 1411043 AGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1411102 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | || | ||| | ||| || || | ||| ||||| || Sbjct 1411103 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGACTTCCAGGGTGATGGTCTTG 1411162 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| || || |||||||| Sbjct 1411163 CCAGTGAGGGTCTTGACGAAAATCTGCAT 1411191 >seq11 Length=15446199 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || ||||| || | || ||||||||| ||||| || || | | Sbjct 13254079 CCTCCCCTCAAACGCAGCACCAAATGCAGGGTCGATTCTTTCTGGATGTTGTAATCTGCA 13254138 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | |||| || || || || |||||||| || | || ||||||||| | || Sbjct 13254139 AGGGTCCTGCCATCCTCAAGTTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCTGGAGGA 13254198 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| |||||||| ||| ||| ||||| | |||| || | || || Sbjct 13254199 ATCCCTTCCTTGTCCTGAATTTTCGCCTTGACATTATCAATCGTATCGGAGCTTTCCACT 13254258 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | |||||| || || || ||||| ||||| |||||||||||||| Sbjct 13254259 TCCAGGGTTATAGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 13254305 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||| || ||||| || ||||| | || ||| |||| ||| Sbjct 13442062 ACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCATCCTCC 13442003 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||||||||| || || | | |||||| || |||| | ||| |||||||| | Sbjct 13442002 AGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTGTCCTGA 13441943 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| |||| | || | ||| || |||| ||| || ||||| Sbjct 13441942 ATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGATTGTTTTG 13441883 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| || |||||||||||||| Sbjct 13441882 CCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || | |||| |||| |||| || || || ||||| ||||| Sbjct 11225023 TCCTTCTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAG 11224964 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||| || | || | || ||||| || |||||| ||||| Sbjct 11224963 ATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACATTG 11224904 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | |||||| |||| || |||||||| || || |||||||||||| Sbjct 11224903 TCAATAGTATCAGAGCTCTCAACCTCGAGAGTGATGGTTTTGCCAGTTAGAGTCTTCACA 11224844 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 11224843 AAGATCTGCAT 11224833 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||||||||| | ||| |||| || | || || || || ||||| ||||| | Sbjct 13253393 TTCCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTG 13253452 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| | | |||| || |||||||| || ||||| || | ||||||||||||| | | Sbjct 13253453 CAAGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAG 13253512 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| ||| || |||||| |||| | || ||||| Sbjct 13253513 GAATACCTTCTTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAA 13253572 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || || | ||||| |||||||||||||| Sbjct 13253573 CCTCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| ||||| ||||| || || | |||| ||| | || || ||||| Sbjct 13441373 GTGAAGCGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTG 13441314 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 |||||||| || || || || ||||| || | || | || ||||| || ||||| Sbjct 13441313 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGGATCTT 13441254 Query 34898 CTGTTTGACGGATGCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTC 34953 | |||||| ||||||| | ||| ||| || |||| ||| ||||| || | Sbjct 13441253 CGCCTTGACGT----TATCGATGGTATCGGAGCTCTCGACTTCGAGGGTAATGGTCTTGC 13441198 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 | || | || ||||||||||||||||| ||| Sbjct 13441197 CGGTTAAGGTTTTCACAAAGATCTGCATCTTC 13441166 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | | | ||| | || || ||||| || ||||| || Sbjct 13441588 TCCTTCTGGATGTTGTAATCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAG 13441529 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| |||| | ||||||||||| ||||| || ||| Sbjct 13441528 ATGAGGCGCTGCTGATCTGGCGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTTA 13441469 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||||| || |||||| || | || || ||||||||||| || || |||||| Sbjct 13441468 TCTATCGTGTCGGAACTCTCAACCTCCAGCGTGATCGTTTTTCCCGTTAGGGTTTTCACA 13441409 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 13441408 AAAATCTGCAT 13441398 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||||||||| || | || ||| |||| || ||||| || || ||||| Sbjct 13442500 TCCTTCTGAATGTTATAATCAGCGAGAGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAG 13442441 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| ||||||||| | || | || ||||| || ||||| ||||| || Sbjct 13442440 ATCAGTCTCTGCTGGTCTGGTGGGATGCCTTCCTTATCCTGGATCTTTGCCTTGAC--AT 13442383 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| || | ||| ||| || || | ||| ||||||||||| || | ||||| Sbjct 13442382 --TATCAATGGTGTCCGAACTCTCCACTTCCAGGGTGATGGTTTTTCCTGTCAATGTCTT 13442325 Query 34967 CACAAAGATCTGCATA 34982 ||| || ||||||||| Sbjct 13442324 CACGAAAATCTGCATA 13442309 >seq8 Length=21523998 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 |||||||||||||| ||||| ||||| || | | ||||| || |||||||| || ||| Sbjct 16226399 GTGCTTTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCG 16226340 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || ||||| |||||||| ||||| | || ||||| || || || ||| || || Sbjct 16226339 GCGAATATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTC 16226280 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 || | ||| | || ||| ||||| | |||||||||||||| || | ||| Sbjct 16226279 ACATTTTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTC 16226220 Query 34965 TTCACAAAGATCTGCAT 34981 || || ||||||||||| Sbjct 16226219 TTAACGAAGATCTGCAT 16226203 >seq6 Length=25289714 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || |||| || |||||||| ||||| || Sbjct 19867591 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCCTCGAGCTGTTTCCCGGCGAAG 19867532 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| | || | || ||||| || ||||| || ||| Sbjct 19867531 ATGAGACGTTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTG 19867472 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || || || || | ||||||||| || ||||| || |||||||| Sbjct 19867471 TCGATGGTATCGGAGGATTCTACCTCCAAGGTTATGGTCTTGCCCGTAAGGGTCTTCACG 19867412 Query 34971 AAGATCTGCATATTCG 34986 || |||||||| |||| Sbjct 19867411 AAAATCTGCATCTTCG 19867396 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| | || | || | || || ||||| |||||||| || Sbjct 179460 TCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 179401 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| |||||| Sbjct 179400 ATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 179341 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || || || || | ||| ||||| || ||||| || || || || Sbjct 179340 TCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGTTAGGGTTTTGACG 179281 Query 34971 AAGATCTGCATATTCG 34986 ||||||||||| |||| Sbjct 179280 AAGATCTGCATCTTCG 179265 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | |||| || | ||||| |||| |||||| || || || || |||| Sbjct 18207713 CCTCCCCTGAGTCTCAGGACGAGGTGAAGTGTGGATTCTTTTTGGATATTGTAATCCGCC 18207772 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| ||| |||| |||| |||||| || ||||||||||| | ||||||||| | || Sbjct 18207773 AGGGTTCTGCCATCTTCCAACTGTTTACCAGCAAATATTAGCCTCTGCTGGTCTGGAGGT 18207832 Query 34875 ACCCCCTCCTTGTC 34888 | || || ||||| Sbjct 18207833 ATGCCTTCTTTGTC 18207846 >seq5 Length=18898134 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| || || || || | ||| |||| |||| || || || || || ||||| Sbjct 2599368 TTCCTTCTGGATATTGTAATCTGCAAGAGTTCGCCCATCCTCAAGTTGCTTCCCAGCAAA 2599427 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 |||||| |||||||| || |||| | |||||| ||||| ||||| |||||| Sbjct 2599428 TATTAGCCGTTGCTGATCAGGCGGAATCCCCTCTTTGTCCTGGATCTTTGCTTTGACATT 2599487 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | |||||| || | || |||||||| || || || || ||||| Sbjct 2599488 GTCAATGGTATCTGAGCTCTCAACCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTCAC 2599547 Query 34970 AAAGATCTGCAT 34981 ||| |||||||| Sbjct 2599548 AAAAATCTGCAT 2599559 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || || || | | | | | | |||| || || ||||| || ||||| Sbjct 2599140 TTCCTTCTGAATATTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGTTTGCCAGCAAA 2599199 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||||||| | || | |||||||||||| ||| || |||||| Sbjct 2599200 GATCAATCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATT 2599259 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | ||||| || | ||| || ||||| || || ||||||||||| Sbjct 2599260 GTCAATTGTGTCTGAGCTTTCAACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCAC 2599319 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 2599320 AAATATTTGCAT 2599331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324569362720608