Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq16236 630 8e-176 seq8 315 8e-81 seq6 178 1e-39 seq2 120 3e-22 seq3 114 1e-20 >seq16236 Length=153324 Score = 630 bits (698), Expect = 8e-176 Identities = 725/973 (75%), Gaps = 2/973 (0%) Strand=Plus/Plus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| ||||| |||||||||||||| ||||| || | Sbjct 423 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTGATG 482 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||| ||||| | |||||| ||| ||||| || | | || ||||| || Sbjct 483 ATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACAGATTGGTTGAAATTG 542 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || || || || || || ||||| ||||| | ||| | ||||| ||||| || || || Sbjct 543 AAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACCAGATACCCACT 602 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||| | ||| ||||| | |||||| |||||||| |||||| ||| Sbjct 603 ACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAAACTAGCATATTGG 662 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || ||||| || || |||||||||||||| || |||||| Sbjct 663 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCCTCTTGA 722 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || |||||||||| ||||| | ||| | | |||| Sbjct 723 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 782 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| |||||| | || |||||||||||||| || || Sbjct 783 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCT 842 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||||||||| || || |||||||| |||| |||| ||||| Sbjct 843 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 902 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || || ||||| |||||||| ||| ||||| |||| || || Sbjct 903 AAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAG 962 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||| | || |||||||| ||||| || || |||||| ||||| || Sbjct 963 ATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 1022 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 1023 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGT 1082 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| | |||| |||| |||||| ||||| || |||| |||||| || | | Sbjct 1083 AAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACGGAT 1142 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 |||||||||||||| || || || || | ||| ||||| ||| | |||| | |||| Sbjct 1143 GCTGCTTCCCAAATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTAGGAATAATGGCA 1202 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 || || || || ||||||||||| | | ||| |||| || || ||||| ||||| ||| Sbjct 1203 CCTGAGATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGGTTCACGAATACCATCA 1262 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||| ||||| || ||| ||| ||| ||||| || || ||||| ||| || | | || Sbjct 1263 ATATCTACTGGAGGGGCAGCAATGAAGGCAATAATAAATACAGA-AGTTGCGGTCAATAA 1321 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 || || ||||| | | |||||||| |||| || | |||||| | ||| ||| | Sbjct 1322 GGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCGGTGCTGGTTAT 1381 Query 84944 CCAATCACAGAAG 84956 ||| | ||||||| Sbjct 1382 CCAGTTACAGAAG 1394 >seq8 Length=21523998 Score = 315 bits (348), Expect = 8e-81 Identities = 424/588 (72%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| |||| |||||||||||||| ||||| || | Sbjct 7119925 GGGAAGTTATGAGCATTACGTTCACGCATAACTTCCATACCAAGGTTAGCACGGTTGATC 7119866 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| |||||||||| | |||| | ||||||||| || | | || ||||| || Sbjct 7119865 ATATCAACCCAGGTATTAATTACACAGCCTTGGCTATCAACTACAGATTGGTTGAAATTG 7119806 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || || || || || || ||||| ||||| | ||| | || || || || || | ||| Sbjct 7119805 AAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGGAGTGAAGCAGATACGAACT 7119746 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 | ||||| ||||| | ||| ||||| | || | | |||||| || ||| ||| Sbjct 7119745 ATAGGCCAGGCAGCTAGGAAGAAGTGTAATGATGGGAGCT-GTTGAAACTAGTATA-TGG 7119688 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || ||||| || | |||||||||||||| |||| Sbjct 7119687 AAGATCAATCGGCCAAAATAACCATGAGCTGCTATGATATTATAAGTTTC------TTGA 7119634 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 | |||| ||| ||| | || || |||||||||| ||||| | ||| | | |||| Sbjct 7119633 CTGAACCTGTGACCTTCTTTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 7119574 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| |||||| | || |||||||||||||| || || Sbjct 7119573 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCT 7119514 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || ||||||||| |||| || || |||||||| |||| |||| ||||| Sbjct 7119513 AACATGTGAAATGGGTGCATAAGGTTGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 7119454 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || || ||||| |||||||| ||| ||||| ||| || || Sbjct 7119453 AAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGATCGATTGGGTAG 7119394 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 | | ||| | || | || |||||||| |||| || || |||||| Sbjct 7119393 ATCAAGAAAATAGTGGTAGCAGCTGCAACACGAGCTGAATATGCAACA 7119346 >seq6 Length=25289714 Score = 178 bits (196), Expect = 1e-39 Identities = 188/248 (76%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||||||||| || || |||||||| |||| |||| ||||| Sbjct 6247133 AACATGTGAAATGGGTGCATAAGGATGTTCTGCTCAGCCTGGAATACAATCATGAAGTTG 6247074 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || || ||||| |||||||| ||| ||||| |||| || || Sbjct 6247073 AAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAG 6247014 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||| | || |||||||| |||| | || |||||| ||||| | Sbjct 6247013 ATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGTTGGATATGCAACAGCAATCCAATGT 6246954 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | ||||||||| ||||||||||||||| | | ||||| | Sbjct 6246953 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCATTT 6246894 Query 84645 AGGAAGTG 84652 | |||||| Sbjct 6246893 AAGAAGTG 6246886 >seq2 Length=18500646 Score = 120 bits (132), Expect = 3e-22 Identities = 167/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 84066 ACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCC 84125 |||||| ||| |||| || | | || | ||| || || | || | ||| || ||| Sbjct 3033914 ACACGGCCTTGATTATCAACTACAGGTTGGTCGAAATTGAAATCGTTTAAATTGAAAGCC 3033973 Query 84126 ATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAA 84185 || ||| | ||| | ||||| |||| ||||| || || ||||||||| | | ||| Sbjct 3033974 ATATCGCTGATACCTAAAGCAGTGGACCAGATGCCCACTACAGGCCAAGCAACTAGGAAG 3034033 Query 84186 AAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAG 84245 ||||| | | || |||||||| |||||| |||||||| | || || || || Sbjct 3034034 AAGTGTAACAGATGAGAGTTGTTGAAATTAGCATATTGGAAGATCAATCGGCCAAAATAA 3034093 Query 84246 CCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACC 84298 || ||||| || || |||||||||||||| || ||||||||||| |||||||| Sbjct 3034094 CCATGAGC-GCTACGATATTATAAGTTTCTTCCTCTTGACCGAATTTGTAACC 3034145 >seq3 Length=24928530 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 84226 AGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGAC 84285 |||| | || || || || || ||||| | || |||||||||||||| | ||||||| Sbjct 17256408 AGATCAATCGGCCAAAATAACCATGAGCTACTACGATATTATAAGTTTCTTTCTCTTGAC 17256349 Query 84286 CGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAG 84345 |||| |||||||| | || | |||||||||| ||||| | ||| | |||| Sbjct 17256348 CGAATTTGTAACCTTCATTAGCATATTCATTTTCTGTGGTTTCCCTGATCAACCTTGAAG 17256289 Query 84346 TGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCA 84405 | || | ||||||||||| || |||||| | || |||||||||||||| | || | Sbjct 17256288 TTACCAAGGAACCATGCATAACACTGAATAGGGAGCCGCCGAATACACCAGCTATGCCTA 17256229 Query 84406 ACATGTGAAAGGGATGCA 84423 |||||||||| | |||| Sbjct 17256228 ACATGTGAAATAGGTGCA 17256211 Score = 89.7 bits (98), Expect = 6e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 84657 ACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAA 84716 |||| |||||||| || | || | |||| |||||| || || || |||||||||| Sbjct 18510572 ACAATTAGTTGATATGGACTACTGGTTTATAACCATTCATCAATGGGTGATGCTTCCCAA 18510513 Query 84717 ATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATG 84776 || || | | || ||||| ||||| ||| | |||| | | ||| || || ||| Sbjct 18510512 ATTGGGCAAACGTGGAGACCGATAGCTGCAGAAGTAGGAATAATGACACTTGAGATAATG 18510453 Query 84777 TTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGG 84836 |||||||| || | | ||| |||| || || ||||| | ||| |||||||| || Sbjct 18510452 TTGTTTCCATA-AAGTAAGATCCAGAAACAGGTTCACGAAAACCATCAATATCTCTTGTA 18510394 Query 84837 GGTGCACCAACGAATGCAATGATGAA-ACAG 84866 | ||||||||||| | ||| || || |||| Sbjct 18510393 GAAGCACCAACGAAGGTAATAATAAATACAG 18510363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571157660022880