Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq16236 558 1e-154 seq8 266 1e-66 seq6 163 9e-36 seq3 113 1e-20 seq11 84.2 7e-12 >seq16236 Length=153324 Score = 558 bits (618), Expect = 1e-154 Identities = 716/987 (73%), Gaps = 0/987 (0%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||||||||||||||||| || | Sbjct 407 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 466 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 467 GTTAGCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTAC 526 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || ||||| || || |||||||||||| || || | ||| || Sbjct 527 AGATTGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGT 586 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||| |||||||| ||||| || || || Sbjct 587 GAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTT 646 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || ||||| || |||||||| || || || ||||| Sbjct 647 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 706 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 || ||||| ||||| |||||| | || || | || ||||||| | || ||||| Sbjct 707 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 766 Query 36329 ACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 36388 | || | ||||| || | || ||||||||| ||||| | || ||||| Sbjct 767 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 826 Query 36389 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAA 36448 ||| || || || || | ||| || || || ||||||||||| ||||| || ||||| || Sbjct 827 TACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 886 Query 36449 GACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCC 36508 |||| ||| || |||||||| || ||||| || ||||||||||||||||| ||||| || Sbjct 887 TACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCC 946 Query 36509 TTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGC 36568 ||| || | ||||||| ||||| ||||| || ||||||||||| |||||||| || Sbjct 947 TTGACCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 1006 Query 36569 TACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 36628 ||| ||||| || | |||||| || | ||||||||||||| | || |||| ||| Sbjct 1007 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 1066 Query 36629 AGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAA 36688 | | | ||||| | ||||| | ||||| |||| ||| || || ||||| ||||| Sbjct 1067 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 1126 Query 36689 CCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGA 36748 ||| || || | || ||| |||||||| |||||||| ||||| | |||||| || || Sbjct 1127 CCATTCATCAACGGATGCTGCTTCCCAAATTGGGTAAAAGTGCAAACCGATAGCTGCAGA 1186 Query 36749 TGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG 36808 | || | || || || ||||| || |||||||| || ||||| | ||| || ||||| Sbjct 1187 AGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGG 1246 Query 36809 CTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGT 36868 |||||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | Sbjct 1247 TTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAGGCAATAATAAATACAGA 1306 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 ||| || || | | ||||||||| | || |||||||| || | || || ||||| Sbjct 1307 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1366 Query 36929 GTTTGTACTTGTAACCCAGTCACATAA 36955 | || || || | ||||| ||| || Sbjct 1367 TTCGGTGCTGGTTATCCAGTTACAGAA 1393 >seq8 Length=21523998 Score = 266 bits (294), Expect = 1e-66 Identities = 424/605 (70%), Gaps = 10/605 (2%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||| ||||||||||||| || | Sbjct 7119941 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCACGCATAACTTCCATACCAAG 7119882 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || |||||||| | || ||| |||| || | || | || | | |||||| || Sbjct 7119881 GTTAGCACGGTTGATCATATCAACCCAGGTATTAATTACACAGCCTTGGCTATCAACTAC 7119822 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || ||||| || || |||||||||||| || || | || || Sbjct 7119821 AGATTGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGGAGT 7119762 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTAT-TAT 36207 | || || | | | ||||| ||||| |||||||| ||||| || | | | | Sbjct 7119761 GAAGCAGATACGAACTATAGGCCAGGCAGCTAGGAAGAAGTGTAA--TGATGGGAGCTGT 7119704 Query 36208 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 36267 | || |||| ||| |||||||| | || ||||| || |||||||| || | || |||| Sbjct 7119703 TGAAACTAGTATA-TGGAAGATCAATCGGCCAAAATAACCATGAGCTGCTATGATATTAT 7119645 Query 36268 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 36327 | || |||||| | ||| | | || | || ||||||| | || |||| Sbjct 7119644 AAGT------TTCTTGACTGAACCTGTGACCTTCTTTAGCAGATTCATTTTCTGTGGTTT 7119591 Query 36328 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 36387 | | || | ||||| || | || ||||||||| ||||| | || |||| Sbjct 7119590 CCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGA 7119531 Query 36388 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 36447 |||| || || ||||| | ||| || || || ||||||||| | ||||| || ||||| | Sbjct 7119530 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGTTGTTGTGCTCAGCCTGGA 7119471 Query 36448 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 36507 | |||| ||| || |||||||| || ||||| || ||||||||||||||||| ||||| | Sbjct 7119470 ATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTC 7119411 Query 36508 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 36567 |||| | | ||||||| ||||| | || || ||||||||| | |||||||| | Sbjct 7119410 CTTGATCGATTGGGTAGATCAAGAAAATAGTGGTAGCAGCTGCAACACGAGCTGAATATG 7119351 Query 36568 CTACA 36572 | ||| Sbjct 7119350 CAACA 7119346 >seq6 Length=25289714 Score = 163 bits (180), Expect = 9e-36 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 36407 CATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAA 36466 ||| || || || ||||||||||| || || || ||||| || |||| ||| || ||||| Sbjct 6247131 CATGTGAAATGGGTGCATAAGGATGTTCTGCTCAGCCTGGAATACAATCATGAAGTTGAA 6247072 Query 36467 AGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGAC 36526 ||| || ||||| || ||||||||||||||||| ||||| ||||| || | ||||||| Sbjct 6247071 AGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGAT 6247012 Query 36527 TAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCT 36586 ||||| ||||| || ||||||||||| | || ||| || ||| ||||| | | Sbjct 6247011 CAAGAAAACAGCGGTAGCAGCTGCAACAGGAGTTGGATATGCAACAGCAATCCAATGTCG 6246952 Query 36587 CATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 36629 |||||| || | ||||||||||||| | || |||| |||| Sbjct 6246951 CATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAA 6246909 >seq3 Length=24928530 Score = 113 bits (124), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 36657 ACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAG 36716 ||||| ||||||||||| | | | | |||||||| || || | || || |||||||| Sbjct 18510572 ACAATTAGTTGATATGGACTACTGGTTTATAACCATTCATCAATGGGTGATGCTTCCCAA 18510513 Query 36717 ATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATG 36776 |||||| | | ||| |||||||| || || | || | || | | ||||| ||| Sbjct 18510512 ATTGGGCAAACGTGGAGACCGATAGCTGCAGAAGTAGGAATAATGACACTTGAGATAATG 18510453 Query 36777 TTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGA 36836 ||||||||||| ||||| | ||| || ||||| ||||||| |||||| ||||| | | Sbjct 18510452 TTGTTTCCATAAAGTAA-GATCCAGAAACAGGTTCACGAAAACCATCAATATCTCTTGTA 18510394 Query 36837 GGCGCAGCAACAAATGCAATTAAAAAT 36863 | ||| |||| || | ||| | |||| Sbjct 18510393 GAAGCACCAACGAAGGTAATAATAAAT 18510367 >seq11 Length=15446199 Score = 84.2 bits (92), Expect = 7e-12 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 36778 TGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAG 36837 ||||| | || ||||| | ||| || | ||| |||||||||||||| ||||| || |||| Sbjct 4695761 TGTTTTCGTAAAGTAAAGATCCAGAAAAAGGTTCACGAATACCATCAATATCTACTGGAG 4695702 Query 36838 GCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTA 36897 | ||||||| || ||||| | |||| | | ||| || || | | ||||||||| | Sbjct 4695701 GGGCAGCAATGAAGGCAATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCA 4695642 Query 36898 GTACCCCAAACCACCC 36913 | |||||||| || Sbjct 4695641 AAATACCAAACCATCC 4695626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150425392015544