Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq13 131 3e-25 >seq13 Length=5050363 Score = 131 bits (144), Expect = 3e-25 Identities = 379/570 (66%), Gaps = 19/570 (3%) Strand=Plus/Plus Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539 |||||||||||||| || || || || |||||||||||| || ||||| | | Sbjct 3175672 TGGGAGATGTACAAAAAAGCAGAAGCTTCCTTCTGGACCGCCGAGGAAGTTGATTTATCT 3175731 Query 25540 AAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTG 25599 ||||| | | ||| | || || || |||||| ||||||| |||| |||| Sbjct 3175732 CAGGACCTCCGCCATTGGGAAGCCCTCACCTCCGACGAGAAGCATTTCGTCAAACACGTC 3175791 Query 25600 TTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA-GATTCAC 25658 | || |||||||| ||||| |||||||| || || ||||| || || | |||| Sbjct 3175792 CTCGCCTTCTTTGCTGCCTCCGATGGTATCGTTTTGGAAAATCT-CGCTGGACGCTTCAT 3175850 Query 25659 CAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGAAA 25717 | || || ||| | |||||| ||| |||||||| ||||| || ||||| || | Sbjct 3175851 GAAAGAGGTCCAGATCTCCGAGGCC-CGTGCCTTCTACGGCTTCCAAATTGCCATTGAGA 3175909 Query 25718 ATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGCCG 25774 | | || || ||| |||| || |||||| | | | ||||| | |||| |||| Sbjct 3175910 ACATTCATTCCGAGATGTA---CAGTCTTCTGCTTGAGTCTTACATCAAAGACTCGGCCG 3175966 Query 25775 AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834 ||| | | | || || | || || ||| | | || || | | | |||||| || Sbjct 3175967 AGAAAAACCACCTCTTCCGCGCAATTGAGACCGTTCCTTGCGTGGAAAAGAAGGCCAAGT 3176026 Query 25835 GGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| ||||| | || | || | |||| |||||| | || |||||| Sbjct 3176027 GGGCCATGCGCTGGATTGATGGCTCTGA----ATCCTTTGCTGAGCGGTTAGTCGCCTTT 3176082 Query 25894 GCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||| ||| ||||| || |||||| | || | | ||| ||||| || ||| | || | Sbjct 3176083 GCTTGTGTTGAGGGGATATTTTTCTCGGGGAGCTTCTGC-GCCATATTTTGGTTGAAAAA 3176141 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | |||| ||| ||||||| ||||| ||||| || | || | || || ||| Sbjct 3176142 GCGCGGGATGATG-CCGGGCTTGACTTTCTCCAATGAATTAATTTCGCGAGATGAAGGTT 3176200 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | || | |||||||| |||||||| |||| Sbjct 3176201 TGCATTGTGATTTTGCGTGCCTGCTTTACA 3176230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928656290947840