Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq16236 497 3e-136 seq8 242 1e-59 seq6 150 5e-32 seq2 122 3e-23 >seq16236 Length=153324 Score = 497 bits (550), Expect = 3e-136 Identities = 686/957 (72%), Gaps = 2/957 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 411 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 470 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 |||||||| | || |||||||| || || || || | || | | | | | | |||| Sbjct 471 GCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACAGAT 530 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || |||||||| || | |||||||||||| || | || | |||| ||| Sbjct 531 TGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAAC 590 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || ||||| || |||||||| ||||| || ||||| || | ||| || || || || Sbjct 591 CAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAAA 650 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | || |||||||| || ||||| || || ||||| ||||| Sbjct 651 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 710 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 |||||||||||||| || ||||||| | || || | | ||| || || || | Sbjct 711 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 770 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 771 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 830 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || || || | ||||||||| || |||||||| || ||||||||||||||||| || Sbjct 831 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 890 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | |||| ||||||| || || || || || | |||||| ||||||||||| || || Sbjct 891 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 950 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 || | || || | | ||| ||||| || ||||| || |||||||| || || |||||| Sbjct 951 CCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 1010 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || || || | |||||||||||||| || ||||||||| | Sbjct 1011 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 1070 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || |||| | |||||| | || | |||| | ||||| |||||||| | |||| Sbjct 1071 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCAT 1130 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | || ||||||||||||||||| ||||| | ||||| || | | Sbjct 1131 TCATCAACGGATGCTGCTTCCCAAATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTA 1190 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | ||| ||||| || || ||||| || || | | || |||| || ||||| Sbjct 1191 GGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGGTTCA 1250 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || ||||| || || || || || || ||| ||||| |||||||| || || Sbjct 1251 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAGGCAATAATAAATACAGAAGTT 1310 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTT 22426 |||| ||| ||| | || ||||| | || || |||||||| | ||||||||||| Sbjct 1311 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1366 >seq8 Length=21523998 Score = 242 bits (268), Expect = 1e-59 Identities = 415/600 (69%), Gaps = 8/600 (1%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || ||| |||| || || | |||||||| Sbjct 7119937 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCACGCATAACTTCCATACCAAGGTTA 7119878 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 |||||||| | || ||| ||||||| || || || || | | | | | |||| Sbjct 7119877 GCACGGTTGATCATATCAACCCAGGTATTAATTACACAGCCTTGGCTATCAACTACAGAT 7119818 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || |||||||| || | |||||||||||| || | || | | || || Sbjct 7119817 TGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGGAGTGAAG 7119758 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || |||| || | |||||||||||| || ||||| || | | | |||| | || || Sbjct 7119757 CAGATACGAACTATAGGCCAGGCAGCTAGGAAGAAGTGTA-ATGATGGGAGCTGTTGAAA 7119699 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 |||| |||| ||||||| | || |||||||| || ||||| || | ||||| ||||| Sbjct 7119698 CTAGTATAT-GGAAGATCAATCGGCCAAAATAACCATGAGCTGCTATGATATTATAAGTT 7119640 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 |||| ||| ||| ||| ||| | || || | | ||| || || || | Sbjct 7119639 TCTT------GACTGAACCTGTGACCTTCTTTAGCAGATTCATTTTCTGTGGTTTCCCTG 7119586 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||| ||||||||| ||| | || || ||||| Sbjct 7119585 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 7119526 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || ||||| | ||||||||| || |||||||| | ||||||||||||||||| || Sbjct 7119525 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGTTGTTGTGCTCAGCCTGGAATACA 7119466 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | |||| ||||||| || || || || || | |||||| ||||||||||| || || Sbjct 7119465 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 7119406 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 | | || || | | ||| | || || ||||| || ||| |||| || || |||||| Sbjct 7119405 TCGATTGGGTAGATCAAGAAAATAGTGGTAGCAGCTGCAACACGAGCTGAATATGCAACA 7119346 >seq6 Length=25289714 Score = 150 bits (166), Expect = 5e-32 Identities = 181/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 21905 CATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAA 21964 ||||||||| || |||||||| || || |||||||||||||| || | |||| ||||||| Sbjct 6247131 CATGTGAAATGGGTGCATAAGGATGTTCTGCTCAGCCTGGAATACAATCATGAAGTTGAA 6247072 Query 21965 GGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAAAC 22024 || || || || || | |||||| ||||||||||| || || || | || || | Sbjct 6247071 AGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGAT 6247012 Query 22025 AAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCT 22084 | ||| ||||| || ||||| || ||||||| | || |||||| ||||| | | Sbjct 6247011 CAAGAAAACAGCGGTAGCAGCTGCAACAGGAGTTGGATATGCAACAGCAATCCAATGTCG 6246952 Query 22085 CATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAG 22144 ||| || || || | |||||||||||||| || ||||||||| | || ||| | | Sbjct 6246951 CATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCATTTAA 6246892 Query 22145 GAAGTG 22150 |||||| Sbjct 6246891 GAAGTG 6246886 >seq2 Length=18500646 Score = 122 bits (134), Expect = 3e-23 Identities = 156/212 (74%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 21587 AGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATG--GTAGACACGCCAAGCGCA 21644 || ||||| || |||||| | || || ||||||||||| | || || |||| | Sbjct 3033937 AGGTTGGTCGAAATTGAAATCGTTTAAATTGAAAGCCATATCGCTGATACCTAAAGC--A 3033994 Query 21645 GCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTA 21704 | |||| || || || |||||||| ||| | || ||||| || | | | || || Sbjct 3033995 GTGGACCAGATGCCCACTACAGGCCAAGCAACTAGGAAGAAGTGTAACAGATGAGAGTTG 3034054 Query 21705 TTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTG 21764 || || |||||||||||||||| | || |||||||| || ||||| || || ||||| Sbjct 3034055 TTGAAATTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGC-GCTACGATATTA 3034113 Query 21765 TAAGTCTCTTCCTCTTGACCAAACTTGTAACC 21796 ||||| |||||||||||||| || |||||||| Sbjct 3034114 TAAGTTTCTTCCTCTTGACCGAATTTGTAACC 3034145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146179810732080