Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq16236 497 3e-136 seq8 242 1e-59 seq6 150 5e-32 seq2 122 3e-23 >seq16236 Length=153324 Score = 497 bits (550), Expect = 3e-136 Identities = 686/957 (72%), Gaps = 2/957 (0%) Strand=Plus/Minus Query 41261 AACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTAC 41319 ||||||||||| | |||||||| || || | ||||| || | ||| ||| |||| || Sbjct 1366 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1308 Query 41320 AACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGA 41379 || |||||||| ||||| ||| || || || || || || ||||| || || || Sbjct 1307 TTCTGTATTTATTATTGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 1248 Query 41380 ACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAG 41439 ||| || |||| || | | || || ||||| || || ||||| ||| | |||| | Sbjct 1247 ACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTAC 1188 Query 41440 CAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATG 41499 | || ||||| | ||||| ||||||||||||||||| || | |||||||||| Sbjct 1187 TTCTGCAGCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCAGCATCCGTTGATGAATG 1128 Query 41500 GCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGC 41559 | | |||||||| ||||| | |||| | || | |||||| | |||| || | Sbjct 1127 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1068 Query 41560 TTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGT 41619 ||||||||| || |||||||||||||| | || || || ||| | || ||||| ||| Sbjct 1067 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGT 1008 Query 41620 TGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACA 41679 ||| || || |||||||| || ||||| || ||||| ||| | | || || | || || Sbjct 1007 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCA 948 Query 41680 GGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGT 41739 || ||||||||||| |||||| | || || || || || ||||||| |||| | || Sbjct 947 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGT 888 Query 41740 GTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGT 41799 ||||||||||||||||| || |||||||| || ||||||||| | || || || || || Sbjct 887 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 828 Query 41800 ATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCG 41859 ||| || || | ||| ||||||||| ||| | |||| || || | || | Sbjct 827 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 768 Query 41860 TGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGAC 41919 || || || ||| | | || || | ||||||| || |||||||||||||| || Sbjct 767 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 708 Query 41920 TTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTT 41979 ||| ||||| || || ||||| || |||||||| || | ||||||||||||||||| || Sbjct 707 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 648 Query 41980 TAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTT 42039 || || || ||| | || ||||| || ||||| |||||||| || ||||| ||||| Sbjct 647 CAACAACTCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTT 588 Query 42040 TGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATC 42099 |||| | || | || |||||||||||| | || |||||||| || |||||||| Sbjct 587 CACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCAATC 528 Query 42100 TCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAA 42159 | | | | | | | || | || || || || |||||||| || | |||||||| || Sbjct 527 TGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAACCGTGCTAA 468 Query 42160 CCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 |||||| | || || |||||||| || || || || |||||||| || ||||| || Sbjct 467 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 411 >seq8 Length=21523998 Score = 242 bits (268), Expect = 1e-59 Identities = 415/600 (69%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 41617 TGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGG 41676 |||||| || || |||| ||| || ||||| || || | ||| | | || || | | Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGCTACCACTATTTTCTTGATCTACCCAATCGA 7119405 Query 41677 ACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCT 41736 || || ||||||||||| |||||| | || || || || || ||||||| |||| | Sbjct 7119406 TCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGAT 7119465 Query 41737 GGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGG 41796 || ||||||||||||||||| | |||||||| || ||||||||| | ||||| || || Sbjct 7119466 TGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 7119525 Query 41797 CGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCAT 41856 ||||| || || | ||| ||||||||| ||| | |||| || || | || Sbjct 7119526 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 7119585 Query 41857 TCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGA 41916 | || || || ||| | | || || | ||| ||| ||| ||| |||| Sbjct 7119586 CAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTC------AAGA 7119639 Query 41917 GACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAG 41976 ||||| ||||| | || ||||| || |||||||| || | ||||||| |||| |||| Sbjct 7119640 AACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCC-ATATACTAG 7119698 Query 41977 CTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTG 42036 || || | |||| | | | || ||||| || |||||||||||| | || |||| || Sbjct 7119699 TTTCAACAGCTCCCATCAT-TACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATCTG 7119757 Query 42037 GTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCA 42096 || || | | || | || |||||||||||| | || |||||||| || ||||| Sbjct 7119758 CTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCA 7119817 Query 42097 ATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGC 42156 |||| | | | | | || || || || ||||||| ||| || | |||||||| Sbjct 7119818 ATCTGTAGTTGATAGCCAAGGCTGTGTAATTAATACCTGGGTTGATATGATCAACCGTGC 7119877 Query 42157 CAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 |||||||| | || || |||| ||| || || || || |||||||| || ||||| || Sbjct 7119878 TAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 7119937 >seq6 Length=25289714 Score = 150 bits (166), Expect = 5e-32 Identities = 181/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 41537 CACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTA 41596 |||||| | | ||| || | ||||||||| || |||||||||||||| | || || Sbjct 6246886 CACTTCTTAAATGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 6246945 Query 41597 GGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTG 41656 || ||| | | ||||| |||||| || | ||||||| || ||||| || ||||| Sbjct 6246946 GGTATGCGACATTGGATTGCTGTTGCATATCCAACTCCTGTTGCAGCTGCTACCGCTGTT 6247005 Query 41657 TTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCC 41716 ||| | | || || | || || || ||||||||||| |||||| | || || || Sbjct 6247006 TTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCT 6247065 Query 41717 GGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTT 41776 || || ||||||| |||| | || |||||||||||||| || || |||||||| || ||| Sbjct 6247066 GGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAGAACATCCTTATGCACCCATTT 6247125 Query 41777 CACATG 41782 |||||| Sbjct 6247126 CACATG 6247131 >seq2 Length=18500646 Score = 122 bits (134), Expect = 3e-23 Identities = 156/212 (74%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 |||||||| || |||||||||||||| ||||| ||||| || || ||||| || |||||| Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || | |||||||||||||||| || || || || | | | || ||||| || Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTCATCTGTTACACTTCTTCCTA 3034027 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTAC--CATGGCTT 42068 | ||| |||||||| || || || |||| || |||| || || | ||||||| Sbjct 3034026 GTTGCTTGGCCTGTAGTGGGCATCTGGTCCACT--GCTTTAGGTATCAGCGATATGGCTT 3033969 Query 42069 TCAACTTGAATGGTTTCAACTTTAACCAATCT 42100 |||| || || | |||||| || ||||| || Sbjct 3033968 TCAATTTAAACGATTTCAATTTCGACCAACCT 3033937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146186209498144