Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq16236 598 5e-166 seq8 302 5e-77 seq6 154 2e-32 seq2 149 7e-31 seq3 105 8e-18 seq11 84.2 3e-11 >seq16236 Length=153324 Score = 598 bits (662), Expect = 5e-166 Identities = 713/966 (74%), Gaps = 6/966 (1%) Strand=Plus/Minus Query 154993 GACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCT 155052 || ||||| | || | || ||||| |||||| | ||||||||| | | | | || Sbjct 1369 GAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCA 1310 Query 155053 GCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGT 155112 || | || ||| | |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct 1309 ACTTCTGTATTTATTATTGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGT 1250 Query 155113 GAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCT 155172 ||||| || |||| |||||| | || || ||||| || ||||| ||||| || | ||| Sbjct 1249 GAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCT 1190 Query 155173 AGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAG 155232 | ||| || || ||| | ||||| || || ||||||||||||||| | ||||||| Sbjct 1189 ACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCAGCATCCGTTGATGAA 1130 Query 155233 TGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 155292 ||||| ||||| |||||||||| |||| | || | |||||| | | || | | Sbjct 1129 TGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1070 Query 155293 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGT 155352 ||| |||||| ||||||||||| || |||||| || ||||| |||||||| | Sbjct 1069 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCT 1010 Query 155353 GTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGT 155412 |||||||| || || || || | ||||| |||||| ||| | | || || ||||| Sbjct 1009 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGT 950 Query 155413 CAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 155472 ||||| ||| ||||||| |||||||| || || ||||||||||| |||| ||| | Sbjct 949 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATT 890 Query 155473 GTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGT 155532 || ||||| || || ||||| |||||||||||||| || |||||| | || ||||| ||| Sbjct 889 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 830 Query 155533 GTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATC 155592 || ||||| || || || ||| ||||||||| ||||| ||||| || ||| | ||| Sbjct 829 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 770 Query 155593 CGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAA 155652 | ||||| || || | || ||| || | ||||||| ||||| ||||| |||||| Sbjct 769 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 710 Query 155653 ACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCC 155712 |||||||| || || || |||||||| || || || || | |||||||| ||||| Sbjct 709 ACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 650 Query 155713 TTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGG 155772 ||||||||||| | | ||||||||||| ||||| |||||||| || | |||||| Sbjct 649 TTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGG 590 Query 155773 GCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 155832 |||||| | ||| | || ||||| |||||||| ||||||||||| |||||||| Sbjct 589 TTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCAA 530 Query 155833 TCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGC 155889 |||||||| || |||| || || || ||| ||||| || || | ||||| Sbjct 529 TCTGTAGTTGA---TAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAACCGT 473 Query 155890 GCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTT 155949 ||| |||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||| Sbjct 472 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 413 Query 155950 GCTGCT 155955 |||||| Sbjct 412 GCTGCT 407 >seq8 Length=21523998 Score = 302 bits (334), Expect = 5e-77 Identities = 433/605 (72%), Gaps = 10/605 (2%) Strand=Plus/Plus Query 155352 TGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGG 155411 ||||||||| || || | || | ||||| | || | ||| | | || || ||| Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGCTACCACTATTTTCTTGATCTACCCAATCGA 7119405 Query 155412 TCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTT 155471 |||||| ||| ||||||| |||||||| || || ||||||||||| |||| ||| | Sbjct 7119406 TCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGAT 7119465 Query 155472 CGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGG 155531 || ||||| || || ||||| | |||||||||||| || |||||| | || ||||| || Sbjct 7119466 TGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 7119525 Query 155532 TGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAAT 155591 ||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| | || Sbjct 7119526 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 7119585 Query 155592 CCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGA 155651 | | ||||| || || | || ||| || | ||| ||| |||| | | |||| Sbjct 7119586 CAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTC------AAGA 7119639 Query 155652 AACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATC 155711 ||||||||| || | || |||||||| || || || || | |||||||| ||| | Sbjct 7119640 AACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA-TATACTAG 7119698 Query 155712 CTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTG 155771 ||||||| ||| | | ||||||||||| ||||| |||||| | || | ||||| Sbjct 7119699 TTTCAACAGCTC-CCATCATTACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATCTG 7119757 Query 155772 GGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCA 155831 ||| || | ||| | || ||||| |||||||| ||||||||||| |||||||| Sbjct 7119758 CTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCA 7119817 Query 155832 GTCTGTAGTAGA-CGCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCG 155890 |||||||| || || | || || || ||| |||| || || | ||||| | Sbjct 7119818 ATCTGTAGTTGATAGCCA-AGGCTGTGTAATTAATACCTGGGTTGATATGATCAACCGTG 7119876 Query 155891 CTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTG 155950 || |||||||||||||| |||| || ||||| ||||| ||||||||||| ||||| | Sbjct 7119877 CTAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGACCTAG 7119936 Query 155951 CTGCT 155955 ||||| Sbjct 7119937 CTGCT 7119941 >seq6 Length=25289714 Score = 154 bits (170), Expect = 2e-32 Identities = 166/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| || ||||| | |||||| ||||||||| Sbjct 6246916 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACATTGGATTGCTGTTGCATAT 6246975 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 | | || || | ||||| |||||| ||| | | || || |||||||||| | Sbjct 6246976 CCAACTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 6247035 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || ||||||| |||||||| || || ||||||||||| |||| ||| | || ||||| Sbjct 6247036 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAG 6247095 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTG 155521 || || || || |||||||||||||| || |||||| ||| Sbjct 6247096 GCTGAGCAGAACATCCTTATGCACCCATTTCACATGTTTG 6247135 >seq2 Length=18500646 Score = 149 bits (164), Expect = 7e-31 Identities = 169/221 (76%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 155626 GGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTC 155685 |||||||| ||||| ||||| |||||||||||||| || || || |||||||| || || Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 155686 GGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTT-CACTTCTTCCT 155744 || || | |||||||| ||||| ||||||||||| | | || ||||||||||| Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTC-ATCTGTTACACTTCTTCCT 3034028 Query 155745 TGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACG--ATGGCA 155802 | ||| |||||||| || |||||||| | |||||| | | || ||| || ||||| Sbjct 3034027 AGTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTTAG--GTATCAGCGATATGGCT 3033970 Query 155803 TTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGA 155843 ||||| | |||| |||||| ||| |||| ||||||| || Sbjct 3033969 TTCAATTTAAACGATTTCAATTTCGACCAACCTGTAGTTGA 3033929 >seq3 Length=24928530 Score = 105 bits (116), Expect = 8e-18 Identities = 138/190 (73%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 155072 CCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTT 155131 ||||| ||| ||| || | ||| ||||||||| |||||||||| || |||| |||| Sbjct 18510378 CCTTCGTTGGTGCTTCTACAAGAGATATTGATGGTTTTCGTGAACCTGTTTCTGGATCTT 18510437 Query 155132 TAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTC 155191 | | ||||| |||||||| ||||| ||| || | |||| ||| || || |||| Sbjct 18510438 -ACTTTATGGAAACAACATTATCTCAAGTGTCATTATTCCTACTTCTGCAGCTATCGGTC 18510496 Query 155192 TCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTC 155251 ||||| | | || |||||||||||| || | ||||||| ||||| || | || ||| Sbjct 18510497 TCCACGTTTGCCCAATTTGGGAAGCATCACCCATTGATGAATGGTTATAAACCAGTAGTC 18510556 Query 155252 CTTTCCAACT 155261 | | ||||| Sbjct 18510557 CATATCAACT 18510566 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 155501 TGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTA 155560 |||||| || |||||| | || |||| ||||| ||||| || || || ||| || || Sbjct 17256211 TGCACCTATTTCACATGTTAGGCATAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGTTA 17256270 Query 155561 TGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGA 155620 |||| ||||| ||||| || || | ||| | ||||| || || | || | | | Sbjct 17256271 TGCATGGTTCCTTGGTAACTTCAAGGTTGATCAGGGAAACCACAGAAAATGAATATGCTA 17256330 Query 155621 ACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGAT 155680 | | |||||||| ||||| ||||| ||||||||||||| || || | |||||||| | Sbjct 17256331 ATGAAGGTTACAAATTCGGTCAAGAGAAAGAAACTTATAATATCGTAGTAGCTCATGGTT 17256390 Query 155681 ACTTCGGTCGTCTTATCT 155698 | || || || | |||| Sbjct 17256391 ATTTTGGCCGATTGATCT 17256408 >seq11 Length=15446199 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| ||| || | ||||||||| | | | | || || | || ||| | Sbjct 4695626 GGATGGTTTGGTATTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATT 4695685 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 |||||||||||||| ||||| ||||| |||||||||||||||||||| | |||| ||| Sbjct 4695686 GCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCTTTTTCTGGATCT 4695745 Query 155131 TTAATGTATGGTAACA 155146 ||| | || | |||| Sbjct 4695746 TTACTTTACGAAAACA 4695761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584716507696160