Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq16236 513 4e-141 seq8 230 7e-56 seq6 147 6e-31 >seq16236 Length=153324 Score = 513 bits (568), Expect = 4e-141 Identities = 708/988 (72%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||||||||||| || Sbjct 407 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 466 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTAC 40648 | | ||| | | ||||||||||||| ||| || || | | || ||||| Sbjct 467 GTTAGCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTAC 526 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| || || ||||| || ||||| ||||||||||| ||||| | | || Sbjct 527 AGATTGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGT 586 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 | ||| || || | || || ||||| | || |||||||||| || ||| ||||| Sbjct 587 GAACCAGATACCCACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTT 646 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||||||||| || || | || ||||| ||||| || || |||||||| ||||| Sbjct 647 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 706 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || | || ||||| || | || || | || |||||| |||| ||||| || Sbjct 707 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 766 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||| || | | || ||||||||| || | | || || || Sbjct 767 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 826 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 || || || ||||| | ||| || ||||||||||| || |||||||| || || ||||| Sbjct 827 TACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 886 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| |||||||||||| || ||| ||||||| ||||||||||||||| ||| || Sbjct 887 TACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCC 946 Query 41069 CTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGC 41128 ||||||| ||| || | ||||| ||||| ||| |||| | ||||||| ||||| Sbjct 947 TTGACCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 1006 Query 41129 CACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTA 41188 ||| ||||| |||| |||||| || | | | ||||||||||| | ||| ||| Sbjct 1007 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 1066 Query 41189 TGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAG 41248 ||||| || | ||| ||||| | ||||| |||| ||| || || |||||||||| Sbjct 1067 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 1126 Query 41249 CCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGA 41308 ||| || || | | | |||||||| |||||||| || || | ||||| || ||| Sbjct 1127 CCATTCATCAACGGATGCTGCTTCCCAAATTGGGTAAAAGTGCAAACCGATAGCTGCAGA 1186 Query 41309 GCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGG 41368 | |||| | || || || ||||||||||| ||||| | ||| || || ||||| || Sbjct 1187 AGTAGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGG 1246 Query 41369 CTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATG 41427 ||||| || ||||| |||||||| || || || || || ||||| || || || ||| | Sbjct 1247 TTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAGGCAATAATAAATACA-G 1305 Query 41428 TGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGT 41487 || || || | ||| | || ||||| | ||||||||||| || | ||| || |||| Sbjct 1306 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGT 1365 Query 41488 TGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | |||||||| || | ||||||||| || Sbjct 1366 TTTCGGTGCTGGTTATCCAGTTACAGAA 1393 >seq8 Length=21523998 Score = 230 bits (254), Expect = 7e-56 Identities = 419/606 (69%), Gaps = 12/606 (2%) Strand=Plus/Minus Query 40529 AGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAG 40588 || ||||| ||||||||| ||||| ||||| ||||| || |||| ||||||||||| || Sbjct 7119941 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCACGCATAACTTCCATACCAAG 7119882 Query 40589 ACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCG-TCTACTA 40647 | | ||| | | |||| |||| ||| ||| || || || || || |||| Sbjct 7119881 GTTAGCACGGTTGATCATATCAACCCAGGTATTAATTACACAGCC-TTGGCTATCAACTA 7119823 Query 40648 CTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCAT-GGAG 40706 | || ||||| || || ||||| || ||||| ||||||||||| ||||| | |||| Sbjct 7119822 CAGATTGGTTGAAATTGAAACCGTTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGGAG 7119763 Query 40707 GTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTG 40766 |||| | || | || | || | ||| | || |||||||||| | | || || Sbjct 7119762 TGAAGC-AGATACGAACTATAGGCCAGGCAGCTAGGAAGAAGTGTAATG-ATGGGAGCTG 7119705 Query 40767 TTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTA 40826 ||||| || |||| ||| || | || ||||| ||||| || || |||| ||| ||| Sbjct 7119704 TTGAAACTAGTATATGGAAG-ATCAATCGGCCAAAATAACCATGAGCTGCTATGATATTA 7119646 Query 40827 TAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTC 40886 ||||| ||| |||| ||| | | || | || |||||| |||| ||||| Sbjct 7119645 TAAGT------TTCTTGACTGAACCTGTGACCTTCTTTAGCAGATTCATTTTCTGTGGTT 7119592 Query 40887 TCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCA 40946 |||| || | ||||| || | | || ||||||||| || | | ||| || Sbjct 7119591 TCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCG 7119532 Query 40947 AAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGG 41006 || || || || || || | ||| || ||||||||||| || ||||||| || || ||| Sbjct 7119531 AATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGTTGTTGTGCTCAGCCTGG 7119472 Query 41007 AAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAA 41066 || |||| |||||||||||| || ||| ||||||| ||||||||||||||| ||| Sbjct 7119471 AATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTT 7119412 Query 41067 CCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTAT 41126 || ||| ||| ||| || | ||||| | || ||| |||| | |||||| ||| Sbjct 7119411 CCTTGATCGATTGGGTAGATCAAGAAAATAGTGGTAGCAGCTGCAACACGAGCTGAATAT 7119352 Query 41127 GCCACA 41132 || ||| Sbjct 7119351 GCAACA 7119346 >seq6 Length=25289714 Score = 147 bits (162), Expect = 6e-31 Identities = 180/246 (73%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 40967 CATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAA 41026 ||| || ||||||||||| || ||||| || || || ||||| |||| |||||||||||| Sbjct 6247131 CATGTGAAATGGGTGCATAAGGATGTTCTGCTCAGCCTGGAATACAATCATGAAGTTGAA 6247072 Query 41027 TGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAAC 41086 || ||| ||||||| ||||||||||||||| ||| || ||||||| ||| || | Sbjct 6247071 AGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGAT 6247012 Query 41087 TAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATCCATGGTCT 41146 ||||| ||||| ||| |||| | |||| || ||||| ||| ||||| ||| Sbjct 6247011 CAAGAAAACAGCGGTAGCAGCTGCAACAGGAGTTGGATATGCAACAGCAATCCAATGTCG 6246952 Query 41147 CATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGCTGCTACTCCTATTAA 41206 |||||| || | | | ||||||||||| | ||| ||| ||||| || |||| Sbjct 6246951 CATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCATTTAA 6246892 Query 41207 AAAGTG 41212 ||||| Sbjct 6246891 GAAGTG 6246886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143674693818024