Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq11 143 5e-29 seq5 127 4e-24 >seq11 Length=15446199 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| ||||| || || || ||||| | || | ||||| ||||| Sbjct 11225752 ATTTGCATTCCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTG 11225693 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | | ||| || ||| || | |||||| |||||||| || |||||||| || Sbjct 11225692 TAATCTGCCAGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGG 11225633 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| ||||||||||| || || ||||| | || | ||| ||| ||||| ||| Sbjct 11225632 TCAGGAGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAA 11225573 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||||| ||||| || || ||||| || || || |||||||| || |||||| Sbjct 11225572 CTTTCAACTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCATT 11225516 Score = 141 bits (156), Expect = 2e-28 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || ||||| |||||||| ||||| || ||||||||||| ||||||||||||||||| || Sbjct 13254388 TGCTTTCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATC 13254447 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | ||||| ||| ||||||||||||| ||| || || |||||||| || || || Sbjct 13254448 TTAGCTTTTACATTATCAATAGTATCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCG 13254507 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || |||||||| |||||||| Sbjct 13254508 GTCAGGGTCTTTACAAAGATTTGCAT 13254533 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || | || |||| |||||| || | ||| || ||||||||| ||| Sbjct 13442311 ATACCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCG 13442252 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || ||| || || || || || || ||||| | ||||||||||| || Sbjct 13442251 GCCAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGT 13442192 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || ||||| | ||||| ||| ||| ||||| || |||| Sbjct 13442191 GGAATTCCTTCTTTGTCCTGAATTTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCA 13442132 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| || || || || ||||||||||| || ||||| Sbjct 13442131 ACTTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 129 bits (142), Expect = 1e-24 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||| ||||| || |||||||| ||||||||||| |||||||| || Sbjct 11224988 ATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTT 11224929 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || |||| || | ||| ||||||||| || |||||| || ||||| || Sbjct 11224928 ATCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCGAGAGTGAT 11224869 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| || || ||||| || ||||| Sbjct 11224868 GGTTTTGCCAGTTAGAGTCTTCACAAAGATCTGCAT 11224833 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||||| || | ||||| |||| ||| | ||| || |||||||||||| Sbjct 13253848 ATCCCTCCTCTCAGTCTCAACACCAGGTGCAGTGTCGACTCCTTTTGAATATTATAGTCA 13253907 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || ||| || | || || || |||||||| || | |||||||||||| Sbjct 13253908 GCGAGGGTCCTGCCATCCTCGAGCTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGG 13253967 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| ||||||| || | ||| |||||| || || |||| Sbjct 13253968 GGAATCCCTTCCTTATCTTGGATTTTGGCCTTAACATTGTCAATAGTGTCCGAGCTCTCA 13254027 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| || || || || | || || ||||| || ||||| Sbjct 13254028 ACCTCCAATGTTATGGTCTTCCCCGTCAAGGTCTTAACAAAAATCTGCAT 13254077 Score = 114 bits (126), Expect = 2e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || || || | ||||| ||| || ||||| || || | | |||| | Sbjct 11225275 CGGAGGACAAGGTGGAGTGTAGACTCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCA 11225216 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| ||||| ||||| || |||||||| ||||||||||| |||||||| || Sbjct 11225215 TCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTG 11225156 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | ||| ||| ||||| || ||| || || ||||| ||| Sbjct 11225155 TCCTGGATCTTCGCTTTGACATTGTCAATGGTATCTGAGCTCTCCACCTCAAGAGTGATA 11225096 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || ||||| ||||| || |||||| Sbjct 11225095 GTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATT 11225060 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | | ||| || |||| ||| | || | || || |||||| |||||| Sbjct 13442083 ATCCCACCGCGGAGTCGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCG 13442024 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || |||||| ||| || | |||||||||||| || || || || || ||||| || Sbjct 13442023 GCTAGAGTTCTACCATCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGC 13441964 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 ||||| ||||| || || || ||||| | || | || || || || || ||| Sbjct 13441963 GGTATCCCTTCCTTGTCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCC 13441904 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || || ||||||||||| || ||||| Sbjct 13441903 ACCTCGAGGGTGATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 100 bits (110), Expect = 5e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || || |||| || | || ||||| | || | ||| || || || Sbjct 11225981 AATTTGCATCCCTCCCCTCAGCCGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTT 11225922 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | | ||||| ||| || | || || || ||||| || || | ||| || Sbjct 11225921 ATAATCAGCAAGAGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTG 11225862 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || ||||||||||| || || || | || | ||| ||| ||||| || Sbjct 11225861 GTCCGGAGGAATACCTTCTTTATCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGA 11225802 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | |||||| |||| ||| || || || || || | ||||| ||||||||||||||| Sbjct 11225801 ACTCTCAACCTCTAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACAAATATTTGCATT 11225744 >seq5 Length=18898134 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| |||||||| || || ||||| | || | || || |||||| || || Sbjct 2599102 ATGCCACCCCTCAATCGCAGCACAAGATGGAGGGTCGATTCCTTCTGAATATTGTAATCT 2599161 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || || ||| || | |||||| || ||||| || |||||||| || || ||| Sbjct 2599162 GCCAAGGTCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGA 2599221 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || ||||| | ||| | ||| ||| || || || ||| Sbjct 2599222 GGAATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATTGTCAATTGTGTCTGAGCTTTCA 2599281 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||||||||| || || || || |||||||||||||| Sbjct 2599282 ACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGCAT 2599331 Score = 114 bits (126), Expect = 2e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || |||||||||||||| | || ||||| | |||| |||||| ||||||| Sbjct 2598868 ATTTGCATCCCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTA 2598927 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | | || || ||| || | || || || ||||| || |||| |||||| Sbjct 2598928 TAATCAGCAAGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGG 2598987 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || ||||| ||||| || || |||| || | ||| || || || ||| Sbjct 2598988 TCTGGAGGAATGCCTTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAA 2599047 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| |||| || || || || || || | ||||| ||||| || ||||| Sbjct 2599048 CTCTCAACCTCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899471815139520