Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq11 127 4e-24 seq5 122 2e-22 seq14 86.0 1e-11 seq15 84.2 4e-11 >seq11 Length=15446199 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | ||| | ||| | ||| || |||||| |||||| Sbjct 13254304 ATTCCACCACGAAGACGAAGGACAAGATGAAGAGTGGACTCCTTCTGGATATTGTAATCA 13254363 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || ||| | || || | || || |||||||| || ||||| || |||||||| Sbjct 13254364 GCAAGCGTGCGTCCGTCTTCAAGCTGCTTTCCAGCAAAAATCAATCTTTGCTGATCAGGA 13254423 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| |||||||||| |||| ||| || || Sbjct 13254424 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTTACATTATCAATAGTATCGGAACTCTCG 13254483 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| || || || | || || | ||| || ||||| Sbjct 13254484 ACCTCGAGAGTTATGGTCTTGCCGGTCAGGGTCTTTACAAAGATTTGCAT 13254533 Score = 125 bits (138), Expect = 1e-23 Identities = 147/198 (74%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||| | | ||||| |||| || | ||| || ||||||||||| ||||| Sbjct 11225015 GATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCT 11224956 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| |||||||| || |||||||| |||||||| || || || ||||| |||| Sbjct 11224955 CTGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACATTGTCAATAGT 11224896 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || || || || ||||| |||||||| ||||||| || || | ||| ||||| Sbjct 11224895 ATCAGAGCTCTCAACCTCGAGAGTGATGGTTTTGCCAGTTAGAGTCTTCACAAAGATCTG 11224836 Query 192534 CATTTTA---TTAGAAAA 192548 ||| | | |||||||| Sbjct 11224835 CATCTGAAATTTAGAAAA 11224818 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| |||||| ||||| | | || | | |||| || | ||||||||| |||||| Sbjct 11225707 TCTTTCTGGATATTGTAATCTGCCAGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAG 11225648 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || |||||||| || ||||| || ||||||||||| || || ||||| || ||||| Sbjct 11225647 ATCAATCTCTGCTGGTCAGGAGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTG 11225588 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | |||||| ||| ||||| |||||||| || |||||||| | || || | | Sbjct 11225587 TCAATTGTATCTGAACTTTCAACTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACA 11225528 Query 192526 AATATCTGCATT 192537 || ||||||||| Sbjct 11225527 AAAATCTGCATT 11225516 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | || | | || ||||| ||||| | ||| || ||||||||||| Sbjct 13442311 ATACCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCG 13442252 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| ||||| || || ||||| || || | ||||||||||| ||| Sbjct 13442251 GCCAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGT 13442192 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| || || ||||| ||||||||| || | ||| || || Sbjct 13442191 GGAATTCCTTCTTTGTCCTGAATTTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCA 13442132 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || ||||| || || || || | ||||| | ||| |||||||| Sbjct 13442131 ACTTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || | || | || | |||| ||| || |||||| ||||| Sbjct 11225290 ATTCCACCACGAAGGCGGAGGACAAGGTGGAGTGTAGACTCCTTTTGGATATTGTAATCT 11225231 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || | ||| || ||||||||||| |||||||| |||||||| Sbjct 11225230 GCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGA 11225171 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || || || || || ||| ||||| || | |||||| || Sbjct 11225170 GGAATTCCTTCCTTGTCCTGGATCTTCGCTTTGACATTGTCAATGGTATCTGAGCTCTCC 11225111 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| || || || || || | ||||| | ||| ||||||||| Sbjct 11225110 ACCTCAAGAGTGATAGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATT 11225060 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || || || || || | ||| | ||| | ||| || ||| ||||||||| Sbjct 11225974 ATCCCTCCCCTCAGCCGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCA 11225915 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||| |||| || | || |||||||||||||| || | ||| || || || Sbjct 11225914 GCAAGAGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGA 11225855 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || || || || ||||| || | ||| || || Sbjct 11225854 GGAATACCTTCTTTATCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCA 11225795 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || |||| ||| ||||| || ||||| || ||||| | |||||| |||||| Sbjct 11225794 ACCTCTAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACAAATATTTGCATT 11225744 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| || | || | || | ||| | |||||| |||||||||||| | Sbjct 11226200 ACCACCACGAAGGCGGAGCACAAGGTGAAGAGTTGACTCTTTCTGGATATTATAATCGGC 11226141 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| || |||| || | || || ||||||||||| | | |||||||| ||||| Sbjct 11226140 AAGTGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCGTTGTTGATCTGGTGG 11226081 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || || || |||||| || | |||||| || || Sbjct 11226080 AATCCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCCAC 11226021 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || ||||| ||||| || || |||| ||| || ||||| Sbjct 11226020 CTCCAGAGTGATTGTTTTTCCAGTCAAGGTCTTAACAAAAATTTGCAT 11225973 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||| || | || | ||| | ||| | ||| || || |||||||||| Sbjct 13442537 ACCACCACGAAGGCGGAGAACAAGATGAAGAGTCGACTCCTTCTGAATGTTATAATCAGC 13442478 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| |||| || | || |||||||||||||| | |||||| || || ||||| Sbjct 13442477 GAGAGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGGTCTGGTGG 13442418 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| ||||| || || || || |||||| || | || || || || Sbjct 13442417 GATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTATCAATGGTGTCCGAACTCTCCAC 13442358 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| || || |||||||| || || ||||| || | || |||||||| Sbjct 13442357 TTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCAT 13442310 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || |||||||| |||| | || | |||| || | || ||||||||||| | Sbjct 13253889 CTTTTGA-ATATTATAGTCAGCGAGGGTCCTGCCATCCTCGAGCTGCTTACCAGCAAAAA 13253947 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | || | |||||||||||| || || ||||| |||||||| ||||| || ||||| Sbjct 13253948 TCAAACGCTGTTGATCAGGGGGAATCCCTTCCTTATCTTGGATTTTGGCCTTAACATTGT 13254007 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 |||| || || || || || | || ||||| || || || || || |||| || Sbjct 13254008 CAATAGTGTCCGAGCTCTCAACCTCCAATGTTATGGTCTTCCCCGTCAAGGTCTTAACAA 13254067 Query 192527 ATATCTGCAT 192536 | |||||||| Sbjct 13254068 AAATCTGCAT 13254077 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 192322 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCA 192381 || || || | ||| | ||| | ||| || ||| || || || | | ||| | || Sbjct 13253407 CGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCAAGTGTCCTACCA 13253466 Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441 || || | ||||||||||||||||| |||| || || || || || || |||||||| Sbjct 13253467 TCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGAATACCTTCTTTG 13253526 Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501 || || ||||| || || || ||| | ||| || || || || | ||||||| Sbjct 13253527 TCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACCTCCAAAGTAATG 13253586 Query 192502 GTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || || || | ||| |||||||| Sbjct 13253587 GTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 >seq5 Length=18898134 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | || || |||| ||| | ||||| |||||| |||||||||||| Sbjct 2598874 ATCCCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 2598933 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | |||| || | || |||||||||||||| |||| |||||| || || Sbjct 2598934 GCAAGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGGTCTGGA 2598993 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || || || ||||| || | ||||| || Sbjct 2598994 GGAATGCCTTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAACTCTCA 2599053 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| |||||||| || ||||| || ||||| | ||| |||||||| Sbjct 2599054 ACCTCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| ||||| | || || | | |||| || | |||||| ||||||||||| |||||| Sbjct 2599150 ATATTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTC 2599209 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || || || || || || || || || ||||| ||| ||||| || | Sbjct 2599210 TGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATTGTCAATTGTG 2599269 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| ||| ||||| || ||||| ||||||||||| | || || | |||||| ||| Sbjct 2599270 TCTGAGCTTTCAACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGC 2599329 Query 192535 AT 192536 || Sbjct 2599330 AT 2599331 >seq14 Length=4882680 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || ||||| | ||| | ||| || ||| || || ||| Sbjct 1410962 ATACCACCACGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 1411021 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | |||||| |||| || | |||||||||||| ||||| | ||||| || || || Sbjct 1411022 GCAAGTGTTCGCCCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGG 1411081 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || ||||| || | || || || Sbjct 1411082 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCG 1411141 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || ||||| || ||||| | || || | || |||||||| Sbjct 1411142 ACTTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 1411191 >seq15 Length=10047770 Score = 84.2 bits (92), Expect = 4e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || || |||||||| || |||||||| |||| || || ||||| || |||||| Sbjct 1769303 AAGCACGCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTT 1769362 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 || || ||||| || || | ||| || ||||||||||||| || || | || || Sbjct 1769363 AAACCCGGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAA 1769422 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTC 49974 ||||| || || ||||| |||||| | |||| || Sbjct 1769423 AATATGCCTTCCACACAAGCAAATCCGATTAATC 1769456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984275204778600