Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq5 122 2e-22 seq11 118 2e-21 seq15 87.8 3e-12 seq14 86.0 1e-11 >seq5 Length=18898134 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | ||| || |||| ||| | ||||| |||||| |||||||||||| Sbjct 2598874 ATCCCACCTCTCAATCGCAAAACTAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 2598933 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | || || | || ||||||||||| || |||| ||||||||| || Sbjct 2598934 GCAAGAGTCCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGGTCTGGA 2598993 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| ||||| || || || || ||||| || || ||||| || Sbjct 2598994 GGAATGCCTTCCTTATCCTGAATCTTGGCCTTGACATTGTCGATTGTGTCTGAACTCTCA 2599053 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| |||||||| || ||||| || ||||| | || |||||||| Sbjct 2599054 ACCTCTAATGTAATGGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 2599103 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||||| || | | | | || || | |||||| |||||||| || ||||| Sbjct 2599149 AATATTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCT 2599208 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || || || || || || ||||| ||| ||||| || || Sbjct 2599209 CTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATTTTTGCTTTGACATTGTCAATTGT 2599268 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| ||| ||||| || ||||| ||||||||||| | || || | ||||| || Sbjct 2599269 GTCTGAGCTTTCAACTTCCAGGGTAATAGTTTTACCAGTAAGAGTCTTCACAAATATTTG 2599328 Query 172067 CAT 172069 ||| Sbjct 2599329 CAT 2599331 >seq11 Length=15446199 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||||| | | | | | || || | ||||||||| ||||| || |||||| Sbjct 11225698 ATATTGTAATCTGCCAGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTC 11225639 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || |||||||| || ||||||||||| || || ||||| || ||||| || ||| Sbjct 11225638 TGCTGGTCAGGAGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTA 11225579 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| ||| ||||| |||||||| || |||||||| | || || | || |||||| Sbjct 11225578 TCTGAACTTTCAACTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGC 11225519 Query 172068 ATT 172070 ||| Sbjct 11225518 ATT 11225516 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || | | || ||||| ||||| | ||| || |||||||||||| Sbjct 13442311 ATACCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCG 13442252 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | | || ||||| || || ||||| ||||| | |||||||| || ||| Sbjct 13442251 GCCAGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGT 13442192 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| || || ||||| ||||||||| || ||||| || || Sbjct 13442191 GGAATTCCTTCTTTGTCCTGAATTTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCA 13442132 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||| || || || || | ||||| | || |||||||| Sbjct 13442131 ACTTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | || | ||| | ||| | ||| || ||||| ||||| Sbjct 13254304 ATTCCACCACGAAGACGAAGGACAAGATGAAGAGTGGACTCCTTCTGGATATTGTAATCA 13254363 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| |||| || | || || ||||||||||| ||||| || || ||||| Sbjct 13254364 GCAAGCGTGCGTCCGTCTTCAAGCTGCTTTCCAGCAAAAATCAATCTTTGCTGATCAGGA 13254423 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || ||| |||||||||| |||||||| || || Sbjct 13254424 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTTACATTATCAATAGTATCGGAACTCTCG 13254483 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| || || || | || || | || || ||||| Sbjct 13254484 ACCTCGAGAGTTATGGTCTTGCCGGTCAGGGTCTTTACAAAGATTTGCAT 13254533 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | || | ||| | ||| | ||| || ||| |||||||| | Sbjct 13442537 ACCACCACGAAGGCGGAGAACAAGATGAAGAGTCGACTCCTTCTGAATGTTATAATCAGC 13442478 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || || | || || | || ||||||||||| || | |||||| ||||| ||||| Sbjct 13442477 GAGAGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGGTCTGGTGG 13442418 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| ||||| || || || || |||||| || || || || || || Sbjct 13442417 GATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTATCAATGGTGTCCGAACTCTCCAC 13442358 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || || |||||||| || || ||||| || | ||| |||||||| Sbjct 13442357 TTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCAT 13442310 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||| | | | ||| | || || | ||| || ||||||||||| |||||| Sbjct 11225470 ATATTGTAATCAGCAAGGGTTCGGCCATCTTCAAGTTGCTTGCCAGCAAAAATCAATCTC 11225411 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || |||||||| || || ||||| || || || ||||| || ||||| || ||| Sbjct 11225410 TGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGGATTTTTGCCTTAACATTGTCAATGGTA 11225351 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || ||||| |||||||| || || || || | ||||| | || |||||| Sbjct 11225350 TCTGAGCTCTCAACTTCCAGAGTAATCGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGC 11225291 Query 172068 ATT 172070 ||| Sbjct 11225290 ATT 11225288 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || || || || || || | ||| | ||| | ||| || || |||||||| Sbjct 11225974 ATCCCTCCCCTCAGCCGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCA 11225915 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | || ||||||||||| || || | ||| ||||| || Sbjct 11225914 GCAAGAGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGA 11225855 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || || || ||||| || ||||| || || Sbjct 11225854 GGAATACCTTCTTTATCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCA 11225795 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || |||| ||| ||||| || ||||| || ||||| | ||||| |||||| Sbjct 11225794 ACCTCTAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACAAATATTTGCATT 11225744 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 |||||||||||||| || |||| || ||||| || || || |||||||| || || ||| Sbjct 13253476 TGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGAATT 13253535 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || || || ||| ||||| || || || || | ||||||||| || ||| Sbjct 13253536 TTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACCTCCAAAGTAATGGTCTTCCCA 13253595 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || || || || | || |||||||| Sbjct 13253596 GTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || |||||||||||||| || | |||||| ||||| || || ||||| |||||||| ||| Sbjct 13253932 TGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGGGGAATCCCTTCCTTATCTTGGATT 13253991 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || ||||| ||||| || || || || || | || ||||| || || Sbjct 13253992 TTGGCCTTAACATTGTCAATAGTGTCCGAGCTCTCAACCTCCAATGTTATGGTCTTCCCC 13254051 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||| || |||||||| Sbjct 13254052 GTCAAGGTCTTAACAAAAATCTGCAT 13254077 >seq15 Length=10047770 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 39116 ATATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175 ||| || || || |||||||| || ||||| || |||| || || ||||| || Sbjct 1769296 ATAAAGCAAGCACGCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGA 1769355 Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235 |||||||| || ||||| || || | ||| || ||||||||||||| || || | Sbjct 1769356 GAAAGTTAAACCCGGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCC 1769415 Query 39236 AGAAAAGAATATACCCTCCACACACGCAAATGCTATTATTC 39276 || || ||||| || |||||||| |||||| | |||| || Sbjct 1769416 CGAGAAAAATATGCCTTCCACACAAGCAAATCCGATTAATC 1769456 >seq14 Length=4882680 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || | | || || || | |||| |||||| ||| || ||||| Sbjct 1410734 ATACCACCACGGAGCCTCAGAACCAAGTGCAGGGTAGACTCTTTCTGAATGTTGTAATCC 1410793 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || ||||| || || ||||||||||| | ||||| ||||| ||| Sbjct 1410794 GCCAAGGTGCGGCCATCCTCCAACTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCTGGT 1410853 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || |||||||| || || || ||||| || ||||| || || Sbjct 1410854 GGGATCCCCTCCTTATCTTGAATCTTGGCCTTCACATTGTCGATGGTATCGGAGCTCTCA 1410913 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||| || || || | || || | || |||||||| Sbjct 1410914 ACTTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 1410963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904952302648800