Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq16236 527 7e-145 seq8 300 2e-76 seq6 127 2e-24 seq2 122 1e-22 seq4 102 9e-17 >seq16236 Length=153324 Score = 527 bits (584), Expect = 7e-145 Identities = 709/984 (72%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| ||| || || || | ||| |||| ||||||||||| || Sbjct 1393 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1334 Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353 |||||||| | ||| | || || || || || ||| | || ||||| ||||| || Sbjct 1333 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCCCC 1275 Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 72413 |||||| ||||| || || || | ||||| ||| | || ||||| | || || ||||| Sbjct 1274 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAA 1215 Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473 || ||||| ||||| | |||| |||| || || || || ||||| || || || Sbjct 1214 TATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAAT 1155 Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTAT 72533 ||||||||||| | | || || ||||| || ||||| |||||||| | || || | Sbjct 1154 TTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 1095 Query 72534 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593 | | |||||| | |||| | || ||||||||| | |||||||||| | | | Sbjct 1094 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1035 Query 72594 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 72653 || || ||| |||||||||| ||| ||||| ||||| ||||| | || || || Sbjct 1034 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 975 Query 72654 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 72713 || ||| | | || ||| ||||||| || || |||||||||||||| ||||| || Sbjct 974 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 915 Query 72714 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 72773 || ||||| |||||||||||| | || ||||| || || |||||||| || |||||||| Sbjct 914 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 855 Query 72774 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 72833 || || ||| ||| ||||| ||| | ||||| || || |||||||| ||||| || Sbjct 854 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 795 Query 72834 TTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGG 72893 ||| | || ||||| | | ||||| || || ||||| || || | || | || Sbjct 794 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 735 Query 72894 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 72953 || | ||||| ||||| |||||||| ||||| || || || |||||||| || || || Sbjct 734 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGG 675 Query 72954 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 73013 |||| |||||||| ||||| ||||||||||||||||| |||||||||||||| || Sbjct 674 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGC 615 Query 73014 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAA 73073 || | |||||||| || | ||||| || | | |||||| | || ||||| ||||| Sbjct 614 TGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAA 555 Query 73074 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAAC 73133 ||| ||||| ||||| ||||||||||| || || ||| | || | | || Sbjct 554 CCTAAACGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATAC 495 Query 73134 ATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGC 73193 |||| ||| | | ||| | || |||||||| |||||||||||||||||| | ||||| Sbjct 494 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 435 Query 73194 ACACAACTTCCCACTAGACCTAGC 73217 || |||||||| ||||||||||| Sbjct 434 TCATAACTTCCCTCTAGACCTAGC 411 Score = 372 bits (412), Expect = 3e-98 Identities = 709/1042 (68%), Gaps = 29/1042 (3%) Strand=Plus/Plus Query 73364 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 73423 ||||| || | ||||| |||||| ||| || |||||||| || | || ||||| || Sbjct 33418 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGC 33477 Query 73424 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 73483 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 33478 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 33537 Query 73484 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTA 73543 || || |||||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 33538 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGTAATTTCTTA 33597 Query 73544 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGA 73603 || || ||||| || || |||| | || | | | ||| | ||||||| || ||||| Sbjct 33598 ACGGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGTTACTATGGGGT 33657 Query 73604 CCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 73663 || || |||||||||||| || || |||| ||||||||| || || |||| ||||| Sbjct 33658 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 33717 Query 73664 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 73723 || | ||||| | || | ||| |||||||||||| | | || |||||| |||| || Sbjct 33718 GCTCTGCATGGCGCTTTCGCACTAATAGGTTTCATGTTACGTCAATTTGAGCTTGCTCGA 33777 Query 73724 CTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACG 73783 |||| | || ||||| || ||| | || || || | || || || || Sbjct 33778 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTT---- 33833 Query 73784 AGCATCT---TTC-TAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATT 73839 | ||| ||| | || ||||| |||| ||| | |||||||||| |||||| || Sbjct 33834 TGTTTCTGTATTCTTGATTTATCCACTAGGGCAGTCTGGTTGGTTCTTTGCACCTAGTTT 33893 Query 73840 CGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCT 73899 ||||| ||||| || ||||| | || | || | || || || || ||| || || Sbjct 33894 TGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGATTTCATAATTGGACGCT 33953 Query 73900 TAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCAT 73959 || ||||||||||||||||| || || ||| || | || | || || ||||| || || Sbjct 33954 GAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGGGCTGCTTTGCTATGCGCTAT 34013 Query 73960 ACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAA 74019 |||||||| || ||| | || || || | |||||| || | | Sbjct 34014 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGAT 34056 Query 74020 GATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTAT 74079 | | ||| |||| ||| | || || | || || || | ||||| |||||| || Sbjct 34057 GGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAAT 34112 Query 74080 GATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATT 74139 | | || |||||| | || ||||| || || ||||| | || ||||| || ||| | | Sbjct 34113 GGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTG 34172 Query 74140 CTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTAT 74199 ||||| ||| ||||||| || ||||| || | ||| | |||| || | || | Sbjct 34173 GTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGT 34232 Query 74200 CGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGC 74259 || ||| | || || ||||| | || || ||||| || ||||| || || | ||||| Sbjct 34233 AGTCGGTTTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCAGC 34292 Query 74260 AGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAG 74319 ||||| || || ||||| || |||||||| || || ||||| | || |||||||| | Sbjct 34293 GGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCG 34352 Query 74320 AGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTT 74379 || |||||| | || ||||| || ||||| ||| || | ||||| || || || | Sbjct 34353 TGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCT 34412 Query 74380 GCCACGAGGCAACGCACTATAA 74401 ||||| || ||||| || ||| Sbjct 34413 ACCACGTGGAAACGCTCTTTAA 34434 >seq8 Length=21523998 Score = 300 bits (332), Expect = 2e-76 Identities = 436/606 (72%), Gaps = 20/606 (3%) Strand=Plus/Plus Query 72618 TGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTC-CTTG-TGTATCCATTC 72675 ||| ||||| ||||| | ||| | || || | || |||| |||| | || ||| || Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGC--TACCACTATTTTCTTGATCTACCCAATC 7119403 Query 72676 GGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATG 72735 | ||| || || |||||||||||||| ||||| || || ||||| |||||||||||| Sbjct 7119404 GATCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 7119463 Query 72736 TTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCA 72795 | || ||||| || || ||||||| || |||||||| || || ||| ||||||||| Sbjct 7119464 ATTGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCT 7119523 Query 72796 GGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTA 72855 ||| | ||||| ||| || |||||||| ||||| ||||| | || ||||| | | Sbjct 7119524 GGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 7119583 Query 72856 ATCAGAGAGACAACAGAGAACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAA 72915 ||||| || || ||||| || || | || | || | | |||| | | || Sbjct 7119584 ATCAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTC------AA 7119637 Query 72916 GAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 72975 ||||| ||||| || | || |||||||| || || || |||| |||||||| ||| | Sbjct 7119638 GAAACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA-TATACT 7119696 Query 72976 TCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTA 73035 ||||||| ||| | ||||||||||||||||| |||| | ||| |||| || | Sbjct 7119697 AGTTTCAACAGCTC-CCATCATTACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATC 7119755 Query 73036 TGGTTAACCTCAATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAAC 73095 || || || | | |||||| | || ||||| |||||||| ||||| ||||| |||||| Sbjct 7119756 TGCTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAAC 7119815 Query 73096 CAATCAGTTGTAGAT-GCAAA--CGGAAAGATT-GTACCAACATGGGGAGATGTTCTTAA 73151 ||||| || || ||| || || | | ||| |||| |||| ||| | | || Sbjct 7119816 CAATCTGTAGTTGATAGCCAAGGCTGTGTAATTAATACC----TGGGTTGATATGATCAA 7119871 Query 73152 CAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGA 73211 | | || |||||||| ||||||||||||| |||| | ||||| || |||||||| ||||| Sbjct 7119872 CCGTGCTAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGA 7119931 Query 73212 CCTAGC 73217 |||||| Sbjct 7119932 CCTAGC 7119937 >seq6 Length=25289714 Score = 127 bits (140), Expect = 2e-24 Identities = 181/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 72529 GTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCA 72588 || |||| |||||| | | ||| | || ||||||||| | |||||||||| Sbjct 6246877 GTAATTTAACACTTCTTAAATGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGT 6246936 Query 72589 TACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCA 72648 | | | || || ||| ||| |||||| ||| ||||| || | ||||| | || || Sbjct 6246937 TTCCGTCTGGGTATGCGACATTGGATTGCTGTTGCATATCCAACTCCTGTTGCAGCTGCT 6246996 Query 72649 TTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTA 72708 || || ||| | | || ||| ||||||| || || |||||||||||||| ||| Sbjct 6246997 ACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTA 6247056 Query 72709 GGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATG 72768 || || || ||||| |||||||||||| | || ||||| || || || ||||| || ||| Sbjct 6247057 GGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAGAACATCCTTATG 6247116 Query 72769 CACCCCTTCCATATG 72783 ||||| || || ||| Sbjct 6247117 CACCCATTTCACATG 6247131 >seq2 Length=18500646 Score = 122 bits (134), Expect = 1e-22 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 72892 GGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTC 72951 || || || ||||| ||||| |||||||| ||||| || || || |||||||| || || Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 72952 GGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTC 73011 || |||| |||||||| ||||| ||||||||||||| | |||||||||||||| Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTCATCTGTTACACTTCTTCCTA 3034027 Query 73012 GCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGGCATTC 73071 | || | |||||||| | | |||| || | | |||||| | ||||| ||| Sbjct 3034026 GTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTTAGGTATCAGCGATATGGCTTTC 3033967 Query 73072 AACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 73110 || | |||| ||||| ||| ||||| | || || ||| Sbjct 3033966 AATTTAAACGATTTCAATTTCGACCAACCTGTAGTTGAT 3033928 >seq4 Length=17356267 Score = 102 bits (112), Expect = 9e-17 Identities = 139/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 73535 AATTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC 73594 ||||| |||| || ||||| || || |||| | || | | | ||| | ||||||| Sbjct 12911566 AATTTCTTAATGGCCGCAGTTTCTAC-CCTGCTAATAGTTTAGCGCATTCTTTATTGTTA 12911508 Query 73595 CTTTGGGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGG 73654 || ||||| || || |||||||||||| || || |||| ||||||||| || || ||| Sbjct 12911507 CTATGGGGTCCTGAAGCACAAGGAGATTTTACCCGTTGGTGTCAATTAGGCGGTCTGTGG 12911448 Query 73655 AACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAG 73714 | ||||| || | ||||| || ||||| |||||||||||| | | || ||||| Sbjct 12911447 ACTTTTGTTGCTCTGCATGGCCCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAA 12911388 Query 73715 ATTGCAGGACTTG 73727 |||| || ||| Sbjct 12911387 CTTGCTCGATTTG 12911375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572757335302880