Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq14 107 2e-18 seq11 102 7e-17 seq6 91.5 1e-13 seq1 91.5 1e-13 >seq14 Length=4882680 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || | |||||||| ||||| ||| | ||| ||| | Sbjct 1410963 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTTGAGAGCTCC 1410904 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| || || || || | || || || Sbjct 1410903 GATACCATCGACAATGTGAAGGCCAAGATTCAAGATAAGGAGGGGATCCCACCAGACCAG 1410844 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || ||||||| ||| || || ||| ||||||||| | | || |||||||||||||| Sbjct 1410843 CAGAGGCTTATTTTTGCTGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCGGATTACAAC 1410784 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| ||||| ||||| |||| | || || || || || Sbjct 1410783 ATTCAGAAAGAGTCTACCCTGCACTTGGTTCTGAGGCTCCGTGGTGG 1410737 >seq11 Length=15446199 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 ||| || ||||| || ||||| ||||| ||||||||||| ||||||||| ||||| || Sbjct 13441163 ATTGAAGATGCAGATCTTTGTGAAAACCTTAACCGGCAAGACCATTACCCTCGAAGTCGA 13441222 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 | |||||| ||| | || || |||||| || || ||||| | || Sbjct 13441223 GAGCTCCGATACCATCGATAACGTCAAGGCGAAGATCCAGGATAAGGAAGGAATTCCTCC 13441282 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 |||||| || | || || | || || || ||||| ||||| | |||||| | || || Sbjct 13441283 GGATCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCCGA 13441342 Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCAC 110476 ||||||||| || || ||||| ||| | ||| Sbjct 13441343 TTACAACATCCAGAAGGAATCCACGCTTCAC 13441373 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCTGA 110331 ||||| || ||||| |||||| | ||||||||||| || ||| |||| |||| || | Sbjct 13441854 ATGCAGATCTTTGTAAAAACTCTGACCGGCAAAACAATCACCCTCGAGGTGGAGAGCTCA 13441913 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | | || || || ||| ||||| ||||| | || ||||| Sbjct 13441914 -GACACCATAGACAACGTCAAGGCTAAAATTCAGGACAAGGAAGGGATACCGCCCGATCA 13441972 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||| | || | || || ||||| |||||||||| ||||| | || || ||||| Sbjct 13441973 GCAAAGGTTGATCTTCGCCGGAAAACAACTGGAGGATGGTAGAACTCTAGCCGACTACAA 13442032 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || | || ||||| | |||| || || || Sbjct 13442033 TATTCAAAAGGAATCGACTCTTCATTTGGTGCTGCGACTCCGCGGTGG 13442080 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| | || ||||| || |||||| | ||| ||| Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | | |||||| || ||| ||||||||||| | || |||||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| || || || ||| |||| |||| || || |||| ||||| || Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || ||||| |||| | || ||||| || || Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGTCCTGAGGCTGCGCGGTGG 13442308 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||||||||||||||||||||| || || || ||||| || | || ||| | Sbjct 11225744 AATGCAAATATTTGTCAAAACTTTGACTGGAAAGACCATCACTTTAGAGGTTGAGAGTTC 11225803 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | | || || ||||||| || |||||||| | || ||| || Sbjct 11225804 GGATACAATTGACAATGTTAAGGCGAAGATTCAGGATAAAGAAGGTATTCCTCCGGACCA 11225863 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | || | ||| ||||| ||||| || |||| |||||| | || ||||| || Sbjct 11225864 GCAGCGCTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGAACTCTTGCTGATTATAA 11225923 Query 110452 CATTCAAAAAGAATCTAC 110469 ||| ||||| || || || Sbjct 11225924 CATCCAAAAGGAGTCAAC 11225941 >seq6 Length=25289714 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 |||||||||||| | || || || || || || || | ||| ||||||||| |||| Sbjct 18207846 GACAAAGAAGGCATACCTCCAGACCAGCAGAGGCTAATATTTGCTGGTAAACAGTTGGAA 18207787 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| |||||| ||||||||||||| || ||||||||||| || | ||| | || | Sbjct 18207786 GATGGCAGAACCCTGGCGGATTACAATATCCAAAAAGAATCCACACTTCACCTCGTCCTG 18207727 Query 110486 AGACT 110490 ||||| Sbjct 18207726 AGACT 18207722 >seq1 Length=18577331 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||||||||| | || || || || || || |||| ||| ||||||||| |||| Sbjct 937478 GACAAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTGGAA 937537 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| |||||| | || |||||||| |||||||||||||| || | ||| | || || Sbjct 937538 GATGGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAACACTTCACCTTGTTTTG 937597 Query 110486 AGACT 110490 ||||| Sbjct 937598 AGACT 937602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412759908452348