Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq14 107 2e-18 seq11 98.7 8e-16 seq5 86.0 5e-12 >seq14 Length=4882680 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || |||||||| || | || ||||| ||||| ||| | ||| ||| ||| Sbjct 1410963 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAAGTTGAGAGCTC- 1410905 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| ||| | | || || |||||| ||||| || || | || || || Sbjct 1410904 CGATACCATCGACAATGTGAAGGCCAAGATTCAAGATAAGGAGGGGATCCCACCAGACCA 1410845 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || || ||| ||||||| | | || ||||||| ||||| Sbjct 1410844 GCAGAGGCTTATTTTTGCTGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCGGATTACAA 1410785 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770 |||||| || |||||||| ||||| |||| |||| Sbjct 1410784 CATTCAGAAAGAGTCTACCCTGCACTTGGTTCTGAG 1410749 >seq11 Length=15446199 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || || || || || || || || | || ||| | Sbjct 13253849 ATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACAATCACTTTGGAGGTTGAGAGTTCG 13253790 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || ||||||| || || |||||| | || ||| ||| Sbjct 13253789 GATACAATAGACAATGTGAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCGGACCAG 13253730 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | | || | ||| ||||| ||||| ||||||| || || | || ||||| || Sbjct 13253729 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAGGACGGCAGGACCCTTGCTGACTATAAT 13253670 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||| || | ||| ||||||||||| || |||| || Sbjct 13253669 ATTCAAAAGGAGTCGACTCTCCACCTGGTGTTGAGACTGAGAGGAGG 13253623 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || || || || || || ||||| || | || ||| ||| | Sbjct 13254077 ATGCAGATTTTTGTTAAGACCTTGACGGGGAAGACCATAACATTGGAGGTTGAGAGCTCG 13254018 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | | || || || || ||||| ||||| | ||| ||||| Sbjct 13254017 -GACACTATTGACAATGTTAAGGCCAAAATCCAAGATAAGGAAGGGATTCCCCCTGATCA 13253959 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | | |||| ||| ||||| ||||| ||||| | || || | || ||||| || Sbjct 13253958 ACAGCGTTTGATTTTTGCTGGTAAGCAGCTCGAGGATGGCAGGACCCTCGCTGACTATAA 13253899 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||| || ||||| ||||||||||| || |||| || Sbjct 13253898 TATTCAAAAGGAGTCGACACTGCACCTGGTGTTGAGACTGAGAGGAGG 13253851 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || || || || || |||||||| | || ||| | Sbjct 13253621 ATGCAGATCTTTGTCAAGACCTTGACTGGGAAGACCATTACTTTGGAGGTTGAGAGTTCG 13253562 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || ||| ||| || |||||||| | || || ||| Sbjct 13253561 GATACAATAGACAACGTCAAGGCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAG 13253502 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || || | || | ||| ||||||||||| ||||| | | ||| | || ||||||||| Sbjct 13253501 CAACGATTGATCTTTGCTGGTAAACAGCTTGAGGATGGTAGGACACTTGCAGACTACAAC 13253442 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||||||||| || | || |||| ||| | ||| | || |||| Sbjct 13253441 ATCCAAAAGGAGTCAACTCTCCATCTGGTCTTGCGCTTGAGGGGAGGAA 13253393 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || || || || ||||| |||||||| ||| | ||| |||| | Sbjct 13442310 ATGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAAGTGGAGAGTTCG 13442369 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || |||||| ||||| |||||| | || || ||| Sbjct 13442370 GACACCATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAGACCAG 13442429 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||||| || | ||| ||||| ||||| ||||| | | ||| | || || || ||| Sbjct 13442430 CAGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTATAAC 13442489 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||| |||||||| || Sbjct 13442490 ATTCAGAAGGAGTCGAC 13442506 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| |||||||||||||| || || || ||||| || | || ||| | Sbjct 11225744 AATGCAAATATTTGTCAAAACTTTGACTGGAAAGACCATCACTTTAGAGGTTGAGAGTTC 11225803 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || |||||| ||||||||||| | || ||| || Sbjct 11225804 GGATACAATTGACAATGTTAAGGCGAAGATTCAGGATAAAGAAGGTATTCCTCCGGACCA 11225863 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | ||| ||||| ||||| || || | || ||| | || || || || Sbjct 11225864 GCAGCGCTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGAACTCTTGCTGATTATAA 11225923 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| ||||||||||| || Sbjct 11225924 CATCCAAAAGGAGTCAAC 11225941 >seq5 Length=18898134 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||||||||| || || || || |||||||| | || ||| | Sbjct 2599103 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCA 2599044 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| ||||| |||||| | || || || Sbjct 2599043 GACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAA 2598984 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| || | || | ||| ||||| ||||| || || | || || | || || || || Sbjct 2598983 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAAT 2598924 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| |||||||| | || | || ||| ||||| |||| || Sbjct 2598923 ATTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGG 2598877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398797871754604